Cylindrospermum stagnale: Cylst_1019
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Entry
Cylst_1019 CDS
T02398
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
csg
Cylindrospermum stagnale
Pathway
csg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
csg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Cylst_1019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csg03400
]
Cylst_1019
Enzymes [BR:
csg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Cylst_1019
DNA repair and recombination proteins [BR:
csg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Cylst_1019
Prokaryotic type
Cylst_1019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AFZ23338
UniProt:
K9WSZ4
LinkDB
All DBs
Position
complement(1180504..1181184)
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AA seq
226 aa
AA seq
DB search
MTNPKISSSWQAVLTEEFDKPYFRKLQDFLEEERLFDNIYPPDEHVFSAFELTPYEKVNV
LLLGQDPYHDENQAHGLCFSVKPGIKLPPSLVNIFKELKADIGFDLPNNGYLVTWAKQGV
LMLNAVLTVKAHIPNSHKNKGWETFTDAVISKVNQKTDPVVFVLWGGYAKKKLKLIDTNR
HIVIQSAHPSPLSAHNGFFGSKPFSAINSALRSCNKSEIDWQIPNL
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatcccaaaatttccagttcttggcaggcagtgcttaccgaagaatttgacaaa
ccctactttcgtaaacttcaagactttctggaagaagaaagactatttgataatatctat
ccacccgatgaacatgtcttttctgcctttgaattgacaccttatgagaaagtgaatgtt
ttattactggggcaagatccctaccatgatgaaaaccaagcacacggtttatgcttttca
gtaaaacccggcattaaactgcccccatcactggtaaatatattcaaagaacttaaagca
gatattggatttgatctgccaaataatggttatctagtaacctgggctaaacaaggtgtg
ctgatgctaaatgcagtactgactgtaaaggcacatataccaaattctcacaaaaataaa
ggttgggaaacttttacagatgcagtaattagcaaagtcaatcagaaaaccgatcctgta
gtctttgtactgtggggagggtacgcaaaaaagaagcttaaattaatagatacaaaccga
catattgttattcaatcagcgcatccttcaccgctatctgcacataatggcttttttggc
agcaaacccttctcagctattaactcagcattacgttcttgcaataaatcagagattgat
tggcaaattcccaacctatag
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