Cylindrospermum stagnale: Cylst_1230
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Entry
Cylst_1230 CDS
T02398
Name
(GenBank) superfamily II RNA helicase
Organism
csg
Cylindrospermum stagnale
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Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
Ski2_cyano_M
DEAD
ResIII
Helicase_C
DEXQc_Suv3
nSTAND_NTPase5
nSTAND3
AAA_22
ATPase_2
MTR4-like_stalk
UPF0184
SKA2
Motif
Other DBs
NCBI-ProteinID:
AFZ23527
UniProt:
K9WVJ3
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Position
1418341..1421019
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AA seq
892 aa
AA seq
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MNYPAPSPELDLGSVFPFELDQFQQDAIASLNAGRSVVVCAPTGSGKTLVGEYAIYRALS
RGKRVFYTTPLKALSNQKLRDFREKFGSDQVGLLTGDASINREAPILVMTTEIFRNMLYG
TPIGQVGISLVDVEAVVLDECHYMNDRQRGTVWEESIIYCPREVQLVALSATVANSDQLT
DWLNRVHGPTDLIYSDFRPVPLEFHFCNPKGLFPLLNETKTKINARLSKRSGKKGKFEHG
RTGRPEAPGIIYTLSQLEQRDMLPAIYFIFSRRGCDKAVAEVGDLWLVNNDESQILRRQI
DDFLSRNPEAGRSGQIAPLYRGIAAHHAGILPAWKVLVEELFQQGLIKVVFATETLAAGI
NMPARTTVISTLSKRTDNGHRLLKASEFLQMSGRAGRRGMDLQGHVVTVQTPFEGAKEAA
YLATSEADPLVSQFTPSYGMVLNLLQTHTLDQTRELIERSFGQYMATLHLRPDYEEIAEI
QAELTQLQEQIAAVDEKELAVYEKLRQRLKVERQILRTLQEQAQKDRQEQLVMMLDFAVS
GTLLSLKDKNITATLPITAVLVAKSPIAAGQSPYLVCLGRDNRWYVATSVDVVDLYAELP
RVEVPPDMLPPSELPLKRGQSIRGNEETAAIAQCIPDPEEFLPTSPEVAAQLSRVTAVQE
QLETHPLHEAGNAAAIFKRRARCIELEAEIEELEGRVGQQSQRHWEEFLSLIEILQQFGG
LDNLVPTTLGQIAAAIRGENELWIGLVFASGELDNLDPHHLAAAAAALVTETPRPDSKVR
YELSNEVAEALAKLRGIRRQMFQVQRRYNVALPIWLEFELIAIVEQWALGMEWIELCENT
TLDEGDVVRLLRRTLDLLSQIPHVPNLPDSLQRNAYRAMQLIDRFPVNEVME
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
gtgaattatcctgcgccgtctccagaacttgaccttgggtcagtttttccctttgaacta
gatcaattccagcaggatgcgatcgcctccttaaatgctggacgctcagtagttgtatgt
gcgcccaccggttcaggcaaaacattggtaggggaatacgccatttatcgcgccctgtcg
cgaggaaaacgcgtattttacacaacacctctaaaagcgttatcaaatcaaaaactacgt
gactttcgggaaaaatttgggtcagatcaagttggactgttaactggagatgcctccatt
aacagagaagcaccaattttggtgatgaccacagaaattttccgaaatatgctctatggc
acacccatagggcaagttggcatctcattagtagatgtagaagcagtggtgctagatgag
tgccactacatgaacgatcgccaacggggtacagtttgggaagaatcaattatctattgc
ccccgtgaagtccaacttgtcgccctttccgccacagttgccaacagcgatcaactcaca
gactggctaaatcgggttcatggtcccacagacctaatttactccgattttcgcccagta
cccttggaatttcacttttgcaatcccaaggggttatttcccctgctgaatgaaaccaaa
accaaaattaacgcccggttatcgaagcgaagcgggaaaaaaggtaaatttgagcatggt
agaactggtagaccagaagctcccggcattatttataccctgagccaactagagcaacgg
gatatgctgccagcaatttactttattttcagccgccggggatgcgataaagccgtggca
gaagtgggtgatttatggttggtaaataatgatgagtcccaaatattgcggcgacaaatt
gatgattttttaagccgtaatcccgaagctgggcgttctggacaaattgcgcccctatat
cgcggaattgccgctcaccatgctgggattttacctgcatggaaagtcttggtagaagaa
ctattccagcaggggctgattaaagtagttttcgccaccgagactctggcagcgggaatt
aatatgcccgcccggacaacagttatttccaccctttccaaacgtaccgacaacgggcac
cgtctattaaaagcttccgaattcctgcaaatgtcaggccgggctggtcgccgggggatg
gatcttcaaggtcatgtggtgacagtccaaactccctttgaaggagccaaagaagcggct
tatttagctacatctgaggcagatcctctagtgagccagtttacgcccagctacggcatg
gtgctcaacttactacaaacccacaccctagaccaaaccagagaactgatagaacgcagc
tttggtcaatatatggcaaccttacatttaagaccagattatgaggaaattgcggaaatc
caagcagaattaacccaactccaggaacaaatcgccgcagttgatgaaaaagaactggct
gtgtatgagaaattgcggcaacgcttgaaagtagaacgccagatattaagaactctacaa
gagcaagcacagaaagacagacaggaacagttggtgatgatgctggactttgcagtttcc
ggaacattgctgagtctcaaagacaagaacatcacggcaactttgcccattaccgctgta
ttagttgctaaaagtccgattgctgctggtcaaagcccttacttggtatgcttggggcga
gataaccgttggtatgtggcaacctctgtagatgtcgttgatttgtatgctgaactgcca
cgggtggaggtgccgcctgatatgctaccaccgtcagaactgcccttgaaaagaggacag
tctatccgtggtaacgaagaaaccgccgccattgcacaatgcatacccgatcctgaggag
tttttgcctacgtctccggaagtggctgcacaactttctcgtgttactgctgttcaagag
caattagaaactcaccctttacatgaagctggtaatgctgcggctatattcaaacgcaga
gcacgctgcattgaattagaagccgaaatcgaagagttagaagggcgggtaggtcaacag
tcccaacgtcattgggaagagtttctcagtttaattgaaattttgcagcaatttggtggt
ttggataacttggtgcctacgacattggggcaaatcgcggcggcaattcgcggcgagaat
gaattgtggatcggtttagtcttcgctagtggtgaattggacaacttagatccgcaccat
ttagcagcagctgcggcggctttagtcacagaaaccccccgtcctgatagtaaggtgcgc
tatgaactcagtaatgaggtggcagaggctttggccaaactgcggggaattcgccgtcaa
atgttccaagttcaacggcgctataatgtcgccttgcctatttggttggaatttgagtta
attgcgatcgtcgaacagtgggcactgggaatggagtggatagaactgtgcgaaaatacc
accttggatgagggggatgtggtgagacttttacgccggacgttggatttattatcccag
attccccatgttcccaatttgccggattctttgcagcgcaatgcttatcgggctatgcaa
ctaattgatcgattcccggtgaatgaagtgatggagtga
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