Cylindrospermum stagnale: Cylst_1384
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Entry
Cylst_1384 CDS
T02398
Name
(GenBank) SSU ribosomal protein S12P methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
csg
Cylindrospermum stagnale
Brite
KEGG Orthology (KO) [BR:
csg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csg03009
]
Cylst_1384
Enzymes [BR:
csg01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Cylst_1384
Ribosome biogenesis [BR:
csg03009
]
Prokaryotic type
ribosomal protein modification factors
Cylst_1384
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Mur_ligase_C
Thioredoxin_6
Motif
Other DBs
NCBI-ProteinID:
AFZ23672
UniProt:
K9WVZ7
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Position
1596885..1598228
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AA seq
447 aa
AA seq
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MGDKPTIAISHLGCEKNRIDTEHMLGLLVEAGYGVDTNEELADYVIVNTCSFIEAAREES
VRTLVELAEANKKIVITGCMAQHFQSQLLEELPEAVAVVGTGDYHKIVNVIERVEQGERV
KLVSAEPTYIADENTPRYRTTTEGVAYLRVAEGCDYRCAFCIIPHLRGNQRSRTIESIVA
EAKQLASQGVKEIILISQITTNYGLDIYGKPKLAELLRALGEVDVPWIRMHYAYPTGLTP
EVMAAIQETPNFLPYLDLPLQHSHPEILRAMNRPWQGRVNDGIIDRIKSALPSAVLRTTF
IVGFPGETQEHFEHLLEFIQRHEFDHVGVFTFSPEEGTPAFNLPNQLPQEVMAERHHRVM
ELQQPISQKQNQREVGKIVDVLIEQENPESGELIGRSGRFSPEVDGQVYVKGVGAASHRE
AKLGTIVPVAIQSADAYDLYGQVVNSH
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggtgataagccaacaattgccatttctcacctaggctgcgagaaaaatagaattgat
acggaacacatgttaggactgctggtagaagcaggctacggtgttgatacaaatgaagag
ttagccgattacgttattgtcaatacctgtagttttattgaagccgccagggaagaatct
gtcagaactttagtagaactggcagaagctaataaaaaaattgtcatcaccggctgcatg
gcacagcactttcaatcacaattgttggaggagttgcccgaagcagtagccgtggttggt
acaggcgattatcacaaaattgtcaatgtcattgaacgggtagaacagggagagcgggtt
aaactcgttagtgcggaacctacctatattgccgatgaaaatacaccgcgctaccgcact
acaaccgaaggcgttgcctacctgcgggttgccgaaggatgtgattatcgttgtgcattt
tgtattattccccatctacgaggaaaccagcgatcgcgtactattgaatcgatagtcgcc
gaagccaagcagttggctagtcaaggggtaaaagaaattattctgatttcccaaatcacc
accaattatggtttggatatttacggaaaaccgaagctagccgagttgctgcgtgctctg
ggagaagtagatgtaccgtggatcagaatgcattacgcttatcctaccggactaacccca
gaagtgatggcggcgatccaagaaacacccaatttcttgccttatttagatttgcccttg
caacattctcatccagagattctccgcgccatgaaccgtccctggcaaggacgcgtgaat
gacgggatcatagatcgcattaagagtgcgctaccatcagctgtgctgcgaacaacattt
atcgttgggttccctggagagacacaagagcattttgaacatctactggagtttatccag
cgacatgaatttgatcatgttggtgtctttaccttttcgccggaggagggaacccccgct
ttcaatctacccaatcagttgccacaagaagtaatggcagagcgccaccacagagtgatg
gaactccagcaaccaatatcgcaaaagcaaaatcaacgggaagtaggcaaaattgttgat
gtcctgattgagcaagaaaatcctgaaagtggtgagttaataggccgttcaggtagattt
tccccagaagtcgatggtcaagtctatgttaaaggcgttggcgcagcttctcatagagaa
gcgaagttaggaaccatcgtgccagtagcgattcaaagtgccgatgcctacgacctctat
ggtcaagttgtcaatagtcattag
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