Cylindrospermum stagnale: Cylst_1607
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Entry
Cylst_1607 CDS
T02398
Name
(GenBank) geranylgeranyl pyrophosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
csg
Cylindrospermum stagnale
Pathway
csg00900
Terpenoid backbone biosynthesis
csg01100
Metabolic pathways
csg01110
Biosynthesis of secondary metabolites
Module
csg_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
csg00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Cylst_1607
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
csg01006
]
Cylst_1607
Enzymes [BR:
csg01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
Cylst_1607
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
Cylst_1607
2.5.1.29 geranylgeranyl diphosphate synthase
Cylst_1607
Prenyltransferases [BR:
csg01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
Cylst_1607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
AFZ23885
UniProt:
K9WU24
LinkDB
All DBs
Position
complement(1875593..1876522)
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AA seq
309 aa
AA seq
DB search
MVATDNLQKTPEEAKLNLAAYLKERQKLCNTALDQSIPVVYPEKIYESMRYSLLAGGKRI
RPILCLAACEMMGGTIDMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGE
NIAILAGDGLLALAFEFPATQTPANVPHERVLQVIARLGKALGAAGLVGGQVVDLDSEGK
LDISLETLNFIHNHKTAALLEASVVCGGLLAGASSEDIQRLTRYAQSIGLAFQIIDDILD
ITATLEQLGKTAGKDLTAKKVTYPSLWGIEESRSKATQLVEAACAELAPFGEKALPLQAI
AHYIVSRNH
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggtagcaacggacaatcttcaaaaaacaccagaggaagccaagttaaacctcgccgcc
tatctcaaagagcgacaaaagctttgtaacactgctttggatcaatcgattcccgtcgtt
tatccagaaaagatttacgaatcaatgcgctactcgctattagcaggaggcaagcggata
cgccccattctctgccttgctgcctgtgaaatgatgggcggcacaatcgatatggccatg
ccgacagcttgcgccttagagatgatccacactatgtccttgattcacgacgacctgcca
gcaatggataacgatgattaccgtcgcggcaaactcacgaatcacaaggtctatggcgaa
aatattgcaattttggctggagatggtttgttggctttagcttttgagtttccagccaca
caaacccctgcaaatgtgccacatgagcgagtattacaggtaattgcccgcttaggcaaa
gcgctgggggctgctggtttagttggcggtcaagtggtggatttggattcagaaggtaag
ttagatatttctctagaaaccctgaatttcattcataatcacaaaacagccgccctatta
gaagcttcggttgtttgtggtgggcttttagccggggcatcatctgaagatatccaacga
ctcactcgttacgctcaaagtattgggctggcattccaaattatcgatgatattttggat
atcaccgctaccttagagcaattaggcaaaaccgctggtaaagacctcacagccaagaaa
gtaacctatcctagcctttggggaattgaggaatcacgctctaaggctacacagctagtt
gaggcagcttgtgcggaattagcaccgtttggggaaaaagcgttacctctccaagcgatc
gctcattacatcgtcagtcgtaatcattag
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