Entry |
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Name |
(GenBank) PAS domain S-box
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Organism |
csg Cylindrospermum stagnale
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
2110805..2115496
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AA seq |
1563 aa
MRLNEHLIDLPTLYHVIDRSPLTISPDSYVVDAIFLMNQERSNSLTLTSFNPSCNSNLWS
HQTTSYVLVVEGGQLLGIFTERDIVRFTATGIDLSKARMAEVMTRQLITLTTTDAQDIFT
AWSLLRQHRIRHLPIVDDGGHLLGIVTETNLLQAFDLVNMVGVVEGLQQNLQHPQAELSQ
ENRQIDAVHCQTHNHFRQLVEADSVEALQINEELQQTLEELQVVEEELRQQNEELAVARE
IVELERQRYQDLFEFAPDGYLVTDADGIIQETNHAAANLLSVRKKYLVGKPLVVFIAQSD
RQSFITQLRNLQHLQHWETFLQPRDGVPFAASIRVAVVCDAQGKRIGCRWLLSNISEQQA
ALRERKRVEEALRQATEELENRVAERTAELSQANVLLQREITERQRAEEALQQSEKLYRQ
LVESQSDLIVRIDLQMRITFANTAACEAFGQQLDEFRGQSLFQFFHPDDMVEVMENMRLI
TLPPYRLTTDEQRASTVNGVRYFQWNVAAIRDETGEVVELQAVGRDVTDSRQMAAELRQS
EEKFRHFAENIQAVIWIASSGSFQEAFYVSPAYEKIWGRSCQSLCDQPEKWIDTIHPDDR
DRIFAKLQRHSLGEPSDVEYRILRPDGTVRWISDRGFAMRDEQGNLYFYGGIAEDITKRK
QSEEALRQSEEKFRHFAENTHALIWIAELESGDNLYVNPAYEKIWERSCQSLRDQPNSWI
DTVYPEDRDRLIVKLEQQKLGESTDLEYRILRPNGAVRWIWDRGFAIRDEQGNISAYGGI
AEDITDRKQAEELLRESESRLSLALEAANMGIWDWNLLTQDKIWSPNVGTLYGLPSGTSC
PSIEDFLNLINPQDREPFSQAVKRSIEQGVEFLIEYQAVWPDGSQHWLNGRGQVYYNDTG
QPIRMIGTTRNISDRKQAEIALRESEELYRSVVTALREGILLVDTDGKIFACNTSAESIL
GLTAQQMIGNTPGKFLGSSIHEDGSPFDHDSYPVALTLQTGESYGNVVMGIYKPNGQLNW
ISINSQPLFHGNDPTLYGAVASFTDITEQQAALHERQQAEQKIREQAALLDIATDAIFVR
DLQTQILFWNQGAERLYGWQAEEALGKNPNELFYPETSQQQEIASLQTVIKSGSWQGELQ
KITKSGQEIIVESRWTLMCNALGQPKSILTVDTDITERKQLQAQFFRAQRLESLGTLAGG
IAHDLNNILTPIMAAAQLLKMRYSQHDERYQQLLTIIENNSKRGAALVKQVLSFARGFKG
ERTIVQVKHLIAEIIHIARQTFPRCIEFTTEIPEDLWAVTGDATQLHQVLMNLVVNARDA
MPDGGTLRVCTENMYIDQAYAQMNLDAKVGHYIVITVADTGIGMPPEILDRIFEPFFTTK
EVGKGTGLGLSTVLGIIKSHNGFVNVFSQVGKGTQFKLFLPSVEATQVLGTDDLEIVPGQ
GELILVVDDEVQIREIAKIILENHNYRSLTASNGIEAIALYAQHKYQISAVLMDMMMPEM
DGITAIRTLQKMNPQVKIIAFSGLSSTELFTQSTGIQVQAFLSKPFTAKELLQNLNHILS
AQS |
NT seq |
4692 nt +upstreamnt +downstreamnt
atgcgactcaatgagcatctaattgatttgcctactttatatcatgttattgatcgttct
cccttaacgattagccctgatagttatgtagtcgatgctattttcttgatgaatcaggaa
cgaagtaatagtttgacactgactagcttcaatccatcatgtaattcaaacctctggagc
caccaaacaactagctatgtcttggtggtagagggaggccagttattaggcatattcacg
gagcgtgatatagtccggtttacagctactgggatagacttatccaaagcgagaatggct
gaggtgatgacgcggcaactaatcaccttgacgacaacagatgctcaggatatcttcaca
gcttggtcactattgcgtcagcatagaattcgccatttaccgattgtggacgatggggga
cacttgctaggaattgtgaccgaaacaaatttgctgcaagcgtttgacctagtgaacatg
gttggtgttgttgaaggtttgcagcaaaatttacaacatccacaagccgaattaagccag
gaaaatcgacaaatagatgctgtacactgtcaaactcacaatcatttcaggcaattggta
gaggcagactctgttgaagcgctccaaattaacgaggaacttcagcagactctagaagaa
ctccaagttgtggaagaggaactgcgtcaacaaaacgaagaactagccgttgcccgtgag
atagtagaattagagcgccagcgttaccaagatttgtttgagtttgctcctgatggctac
ttagtcaccgatgcagatggcatcatccaagaaactaaccatgcagcagcaaatctgctt
tctgtacgcaaaaaatatttggtcggcaaaccattagttgtgtttattgcccagtcagac
cgccagagctttatcactcaactgcgtaatttgcagcacttacagcactgggagactttc
ctccagccacgggatggcgtacctttcgcagctagtatcagggtagctgttgtgtgtgat
gctcaaggtaagcgaatcggctgtcgttggttactgagtaacattagcgaacagcaagct
gcgctacgcgaacgcaaacgggtcgaggaagcactgcgccaagctactgaagagttagaa
aaccgggtggcagaacgcacagcagaactttctcaagctaacgtgctgttgcaacgagaa
atcactgaacgtcaacgcgctgaggaggcattgcagcagagtgagaaactctatcgtcag
cttgttgagagtcagtctgatttgattgtccggattgatttgcaaatgaggattactttt
gcgaatacagcagcctgtgaagcgtttggccagcaactagatgagttccgcggtcagtcg
ttatttcagtttttccatccagatgacatggtggaagtcatggaaaatatgaggctgatc
acattgccaccctatcggttgacgactgatgagcaacgcgcctccacagtcaatggtgtt
cgctactttcaatggaatgttgctgccattagggatgaaacaggagaggtagttgaatta
caagcggtaggcagagatgtcaccgatagcaggcagatggcggcagaattgcggcaaagt
gaggagaaatttcgccattttgccgaaaatatccaggcagttatctggattgccagttca
ggttcattccaagaagccttttatgtgagtcctgcttacgagaagatttggggacggtct
tgccaaagtctgtgcgaccagccggagaaatggatagacacaattcatccagacgatcgc
gatcgcatttttgccaaactacagcgacacagccttggtgaaccgagtgatgtagaatat
cggattttgcgacctgatggaacagtgcgctggatttcggatcggggcttcgccatgcgc
gatgaacaaggtaatctttatttttatggtggcattgccgaagatatcaccaagcgcaaa
cagtcagaggaagcactaaggcaaagtgaagagaaatttcgccattttgccgaaaacacc
cacgcgcttatctggatagccgagctggagtccggggacaacctgtatgtaaatcctgct
tatgagaaaatttgggaacgctcttgtcagagtttgcgcgaccagcctaactcctggata
gatacagtttatccagaggatcgcgatcgcctaattgtcaaactggaacaacaaaaactg
ggcgagtcaacagatttagaatatcgaatattgcgacctaatggagcagtgcgctggatt
tgggatcgcggctttgccatacgagatgaacaaggaaatatctctgcctatggtggcatt
gccgaagatatcactgatcgcaagcaggcagaagagttactgcgagaaagtgagtcccga
ctgagtttagctctagaagcagccaatatgggaatctgggactggaatctcctcacccag
gataaaatttggtctcccaatgtaggtacactttatggtctacccagcggcacatcgtgc
cccagcattgaagactttctcaatttaattaatccgcaagaccgcgagccgtttagtcag
gctgtaaaacgcagcattgagcaaggagtcgaatttctgatcgaatatcaggctgtttgg
cccgacggtagccaacattggttaaacggcagaggtcaggtttactataacgacacaggc
cagccaatacggatgattggtacaacgagaaatattagcgatcgcaaacaggcagaaatc
gcactccgagaaagcgaagaactttatcgttcagttgtcacagccttgcgcgaggggatt
ttgctcgtagatactgatggcaagatattcgcctgcaataccagcgctgaaagcattctt
gggcttaccgcccaacagatgatcggcaatacccctggcaaattcctggggtctagcatt
catgaagacggctctccctttgatcatgacagttatccagtagcattgaccttacaaaca
ggtgaatcttatggcaatgtagtcatgggaatctacaagccgaatggacaattaaactgg
atttcgattaattcccaaccgctatttcatggcaatgatcctaccctttatggagcggtt
gcttcctttactgacatcactgaacagcaagctgccctacacgaacgccagcaggcagaa
caaaaaatccgcgaacaagcggctctacttgatatcgccaccgacgcaattttcgtacgc
gatttacaaacccaaatcttattctggaatcaaggtgcagagcggttgtacggttggcaa
gctgaggaagctctgggcaagaaccccaacgagttattctacccagaaacttcgcagcag
caagagatcgcttccctgcaaaccgtcatcaagtctggctcatggcagggtgagttgcag
aaaattaccaaatccggtcaggaaattattgttgaaagccgttggacactgatgtgcaat
gccctagggcaaccaaaatccatcctcaccgttgataccgacattacagaaagaaaacaa
ctccaagcgcagtttttccgcgcccagcgactggaaagcctcggcactcttgcgggtggc
attgcccacgacttgaacaatatattgacgccaattatggcagcagcgcaattgctcaag
atgagatattcccagcatgatgagcgctatcaacaactactgacaatcatcgaaaacaac
tccaaacgcggtgcagctttagtcaaacaggtattatcttttgcccgtggatttaaaggt
gagcgcacgattgttcaagtcaagcatctgattgcagaaattattcacattgccaggcag
acgtttcccagatgtatcgaatttactacagagataccggaagacctctgggctgttact
ggagacgccacacaactgcatcaagtactgatgaatttagttgtaaatgcccgtgatgcc
atgccagatggcggcactctcagggtttgtacagaaaatatgtacattgaccaagcctat
gcccagatgaatcttgatgctaaagtcgggcattacattgtcattactgttgcggataca
ggaattgggatgccgccagaaatcttagatcgcatatttgagccatttttcaccacaaaa
gaggtcggcaaaggtacaggattgggtctgtcaacggtgctggggattattaaaagccac
aacgggtttgttaatgtcttcagccaagttggtaaaggcactcaattcaagttatttttg
ccatccgtagaagcaacccaagtgctaggcacagacgacctagaaatagttccaggacaa
ggagaactgattttagttgtggatgatgaagtccaaattcgtgagattgccaaaatcatc
ctcgaaaaccacaactacaggtctctgactgctagtaatggcatcgaagcgatcgcactt
tacgcccagcataagtatcaaatcagtgcagtcttaatggatatgatgatgccagaaatg
gatgggatcaccgccatccgcactttgcaaaaaatgaacccacaggtaaaaattattgct
tttagcggactaagctccacagaactatttacccaatctactggaatccaagttcaagca
tttttatcaaaacccttcacagccaaagaattattgcaaaatttaaaccacatactcagc
gcccagagttag |