Cylindrospermum stagnale: Cylst_1994
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Entry
Cylst_1994 CDS
T02398
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
csg
Cylindrospermum stagnale
Brite
KEGG Orthology (KO) [BR:
csg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csg03032
]
Cylst_1994
03400 DNA repair and recombination proteins [BR:
csg03400
]
Cylst_1994
Enzymes [BR:
csg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Cylst_1994
DNA replication proteins [BR:
csg03032
]
Prokaryotic type
DNA Topoisomerases
Cylst_1994
DNA repair and recombination proteins [BR:
csg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Cylst_1994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AFZ24239
UniProt:
K9WWP6
LinkDB
All DBs
Position
2327138..2329306
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AA seq
722 aa
AA seq
DB search
MPKRLLVVESPGKVKKLSQILGSDWIVRASCGHIRELSNEGDDSLGFIMDGNSVRCNYVP
RDQRAKETIQQLKAAVKQVDEVVLATDPDREGETIAWHLKETLGLKEPKRVVYTEITASA
VRNALANPRKLDSNLIGAGLCRDCLDKLVGYKGSPLVWALNNGAKSVGRVQSATLHLICQ
REREILAFVPQDYWSVWVDYAEGFRAFYKGTVNSRAETPEQETETHDDAASNSTEKPESK
RVLSEAEATKLVEEARRYPHQVILFEGKVVNRQPPPPFTTSTLQQAAGSKLRFAPEKTMQ
VAQKLYEAGLITYMRTDSVMLSPEFCASARKWLEQNDPQNVPQQVTKHRSSKTAQEAHEA
IRPTDVFRPSVQLREELPADEFNLYVIIWKRAIASQCRAAQLRKTQVITQSGNLLWQARG
QVIEFYGYARYWPNLSKDAVLPSLQQGQTLTLENAGHEQKQTQPPPRYSEPKLVQLMERK
GIGRPSTYAPTVSTLKKRNYVELKKDNLQPTALGLEVDEFLQKALPDLLEAEFTAKMEDA
LDAISEGKDSWQHYLTTWNQNYFAPALSKAKTVVVNSSATVKTNSVVASKYETSKTRCPD
CKNFLAKIPSTKVRRKYFLKCVSGCENIVLFWNAFNKAWEAPKTKTSQDENSQKPSVKKT
AYPCPVCKKPLEEYSYIKDGQSKTMLRCSAKDSWKDKKHQDVAYFNTAKGWWSPKFGNLP
LF
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaacgccttctagtcgttgaatcacccggaaaagtcaaaaaactgagtcaaatt
ctcggttcagattggattgttcgcgctagttgtgggcacattcgagaactcagtaatgag
ggtgatgattcactgggattcatcatggatggcaatagtgtacgctgcaattatgtgccc
cgcgaccaacgagcgaaagaaacaattcaacaactcaaggctgcggttaagcaagttgat
gaagttgtcttagcaactgacccagaccgggagggagaaacgatcgcatggcatctcaaa
gaaacgttaggtttaaaagagccaaagcgagttgtttacaccgagattacagcatcagcg
gtgcggaatgcgctcgcaaatccccgaaaacttgactccaatttaataggtgcaggatta
tgtcgagattgtctcgacaagctggtaggttacaaaggcagccccctagtttgggcgcta
aataacggtgcaaagagtgtaggaagagtccaaagcgccacattacacctaatttgtcag
cgagaaagagaaattctggcttttgtcccccaagattactggagtgtttgggtagattac
gctgaaggattccgggcattctacaaaggaacggtgaattctcgcgcagaaacaccagaa
caagaaactgaaactcacgatgatgcagcgagtaatagcaccgaaaaaccagaatctaag
cgggttctctcagaagcagaagcaacaaagttagttgaagaagcacggcgttatcctcat
caggttattctctttgaaggaaaagtcgttaatcgtcaaccacctccaccatttaccacc
tccaccctccagcaagctgccggttccaagctgagatttgctcccgaaaaaactatgcag
gttgcccaaaagctttatgaggcagggttaatcacatatatgcgaacagactcggtgatg
ttgagtcctgagttttgtgccagtgcgcgtaaatggttggagcaaaatgatccgcagaat
gtaccccagcaagttaccaagcatcgcagtagtaaaacggctcaggaagcacacgaagct
atccgtcccacagatgtctttcgtccttcagtccaattgcgtgaagaactgcctgctgat
gagtttaacctgtatgtgatcatttggaaaagagcgatcgcatctcaatgtcgtgcggct
caactccgtaaaactcaagttatcactcagtcaggcaatctcttgtggcaagctagaggg
caggtgatagaattctacggttatgcgcggtactggcctaatcttagcaaggatgcagtt
ttaccttcattgcaacagggacaaacgctcactttggagaatgccggacatgagcaaaaa
caaacacagccaccaccacgatacagcgaacccaaactggtgcaactaatggaacgaaaa
ggaattggtcgccccagtacctatgctccgacagtttctactttaaagaaacgcaattat
gtggagttgaaaaaagacaatcttcaacctacagccttggggttagaagttgatgagttt
ttacaaaaggctttaccagatttactagaagcagaattcactgccaagatggaggatgca
ctagacgccatctctgaaggaaaagactcttggcaacattacctaactacttggaatcaa
aattactttgcaccagcgctttccaaagctaaaactgtggttgtcaattcatcagctaca
gtgaaaactaatagtgtggttgcgagcaaatatgaaacttctaaaactcgctgtcctgat
tgtaaaaactttttagccaaaattccgagcactaaagttagaaggaaatacttcctcaaa
tgtgtcagtgggtgtgaaaacattgtgctgttttggaacgcctttaacaaagcttgggaa
gcacccaaaactaaaacatctcaggatgaaaattctcaaaagccttcagttaagaagact
gcatatccctgtccagtctgcaaaaaacctttggaggagtacagttacatcaaggatgga
cagagcaaaactatgctccggtgttcggctaaagattcctggaaggataagaaacatcag
gatgtggcgtactttaatacagcaaaaggatggtggagtccaaaatttggcaatttacct
cttttctga
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