Cylindrospermum stagnale: Cylst_2019
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Entry
Cylst_2019 CDS
T02398
Name
(GenBank) putative transcriptional regulator
Organism
csg
Cylindrospermum stagnale
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_1
TPR_7
TPR_10
TPR_2
TPR_8
Rapsyn_N
CFAP70_TPR_C
TPR_14
NB-ARC
TPR_MalT
TPR_SusR
SNAP
TPR_NPHP3
TPR_6
TPR_16
HTH_77
AAA_22
ARM_TT21_4th
nSTAND1
TPR_19
NPHP3_N
AAA_16
nSTAND6
ATPase_2
WHD_MalT
NACHT
Foie-gras_1
RE_AspBHI_N
TPR_11
MJ1010-like_2nd
Motif
Other DBs
NCBI-ProteinID:
AFZ24263
UniProt:
K9WVN0
LinkDB
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Position
2364831..2367233
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AA seq
800 aa
AA seq
DB search
MVEETNSPSPKSIKMEATANDESKLTQVGHVDAENFNLTTEQLQIVVHLEGSTKAESPGF
LKAGNPPKTLAYWQGREEEIAKLGQWLTDKNTFLIGIEGIGGTGKSMLAAKIYEEIEGLP
KRFWADVSYGAGFSDLARQVLTEFGFRVPEEETKLLEALVKCLKSGQYLLIIDNLESLLQ
LDRQWGSQFYGDFFNAWVEYGGNSKVIVTTRERPELPKFTWLPLKGLKVEEGEALLRELG
IQGDLGEFVKLVDGHPLLLRLVADLLKEVYPQDPDLRRLADLGLGNLSQLLTDSKVIGQH
RLENVGMVLVLDASFERLSELQKALLLNISVYRGAVDSAAAVAVLPGSSEVEIEGELRNL
VKRSLLLEKLDERRRFEFQPVVLEYVRYKAGEQIEAHQRAINYFLLNVKQPPWQTKEDIK
EYLEIFYHRYELENYALAFDILRKCDNFLTLRGYYAIQVNLYDQLIAAWEKNQEREKDNY
RVVFTILGNAHNSLGQYQQAITYHQKSLQIAKKIGDRYGEGSSIIGLGNAHNSLGQYQQA
IDYYQQSLQINREMGDRSGEGFSLNNLGAVYNNWEQYQQAIDFLQQSLHIFKEIDDRSGE
STCLGNLGNAYDCLGQYLQAIHFFQQSLQINREIGDRSKEGNALLNLGNAYNLLADYKQA
INYYQRSLQIAGEIGDLNLKSACLGNLGTIHGHLGNYQQVIQFQQRSMQIAKEIGDLNGE
ANAWLNLGLSLERLNRESDALGAYRNACELYQTMGIDAKVQICNNAIERLSQPRAPVVSR
RGFWGLLHRLWRWLRTWFRR
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggtggaagaaactaactcccctagtccgaaaagcatcaaaatggaggcaactgctaac
gatgagagtaaattaactcaagttggtcatgttgatgcagagaattttaatctgacaaca
gagcagttgcaaattgttgttcatttagaaggtagcaccaaagcagaatcgcctgggttt
ctcaaagcgggaaatcccccaaaaactttggcttactggcagggacgagaagaagaaatc
gccaaattggggcaatggttaactgataaaaatactttcttaattggcattgaaggcatc
ggtggtactgggaaatcgatgttagcagcaaaaatttatgaagaaatcgaaggtttgcct
aagcgcttttgggcagatgttagttatggggcaggttttagcgatttagcgcgtcaagtt
ctcacagaatttggctttcgggttccagaagaagaaactaagttattggaggcgctggtt
aaatgtctgaaatctgggcaatatttattaattattgataatctggagagtttattacaa
ctagatagacagtggggaagtcagttctacggggactttttcaatgcttgggtggaatat
ggcggcaatagtaaggtaatagtcaccactagggaaagaccggaattaccaaaatttaca
tggctacccttgaaaggtttgaaagtagaagaaggggaagcgctgttaagagagttaggt
attcagggggatttaggggagtttgtgaaattggtagatgggcatcccctgctgttgaga
ttggtagcagatttgttaaaagaagtatatcctcaagacccagatttaagacgtttagca
gatttaggtttggggaatttgtcgcagttgttgacagatagtaaggtaattggtcaacat
cggctagaaaatgtggggatggtgttggtgttggatgccagttttgagcgattgagtgag
ttgcaaaaggctttattgctcaatatcagcgtttatcgtggtgctgttgatagtgctgcg
gctgtggctgttttgccgggaagttcggaagtagagattgagggagaactgagaaacttg
gttaagcgttctctgttgttagagaaacttgatgaaaggcggcggtttgagtttcagcct
gtggtgttggagtatgtgcggtataaggctggtgagcagatagaggcgcatcagcgagct
attaattactttcttttgaatgttaaacaaccaccctggcagactaaagaagatatcaag
gaatatttagaaattttctatcacaggtatgaactagaaaattatgccttggcctttgat
atcttgagaaaatgtgataattttttgacattacgcggttactacgctatccaagttaat
ttatacgatcaattaatagcagcttgggagaaaaatcaggaaagagagaaagataattat
cgggtagtttttactattttaggcaatgctcataactcattggggcaatatcagcaggcg
atcacttaccatcagaaatctttgcagatagctaagaagataggcgatcgctatggtgag
ggtagttctataataggtttaggtaatgctcataactcattggggcaatatcagcaggcg
atagactactaccagcaatctttacaaataaatagggaaatgggcgatcgctctggtgaa
ggtttttccttaaacaatttgggtgctgtttacaacaactgggagcagtatcaacaagca
attgattttctccagcaatctttacatatatttaaggagatagatgatcgctctggtgaa
tcaacttgtttagggaatttgggtaatgcttacgattgcttggggcagtatctacaggca
attcattttttccagcaatctttacaaataaatagggaaataggtgatcgtagtaaagaa
ggtaacgccttacttaatttaggtaatgcatacaacctcctggccgactataagcaggca
attaactactaccagcgatcgctacaaatagctggggagataggtgatcttaatcttaaa
agtgcctgcttaggaaatttaggtactattcacggacatttagggaattaccagcaagta
attcaatttcagcaaaggtctatgcaaatagctaaagagataggtgatcttaatggtgaa
gcaaatgcttggcttaatttgggtctatcgttagaaagattaaatcgagaatcagacgca
ttaggtgcttatcgcaatgcctgtgaactatatcagacaatgggaattgatgctaaagta
caaatttgcaacaatgcaattgagcgtctttctcaaccaagagcacctgtagtttctcgt
cgtgggttttggggtttgttacatcgtttgtggcgctggttacgcacttggtttcggcgg
tga
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