Cylindrospermum stagnale: Cylst_2215
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Entry
Cylst_2215 CDS
T02398
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family
KO
K03090
RNA polymerase sigma-B factor
Organism
csg
Cylindrospermum stagnale
Brite
KEGG Orthology (KO) [BR:
csg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csg03021
]
Cylst_2215
Transcription machinery [BR:
csg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Cylst_2215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
Sigma70_r4
HTH_23
HTH_3
Sigma70_ECF
HTH_24
PhyR_sigma-like
LacI
Motif
Other DBs
NCBI-ProteinID:
AFZ24446
UniProt:
K9WXB9
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All DBs
Position
2597423..2598208
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AA seq
261 aa
AA seq
DB search
MAASESSVRSDGMELLHLYHQNPSIKLRNQLVQLHTGLVRKMAHKFSHQCNEPYEDLEQI
GYFGLIRAIERFDPSQGYAFSSFAVPYIRGEMLHFLRDRSTLLKIPRRWQELYNEGQKVR
KELAMTLGRPPKDAEIAKRLQISLQEWQETKLAAQNRMPLSLDATAVHYVDCQITLGEAL
PCPRSHILQQQEEERQQLQGAISLLEDKPRMAVELVFLKEFSRKDAAKKIGTSPMTVTRY
LQKGIQDLICYLQPQIMPTGS
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgagtgagtcctctgtgcgatccgatggtatggagctattacacttataccac
caaaatccttctattaaacttcgtaaccaactagtacagttacatactggcttagtgcgg
aagatggctcataaattcagccatcaatgtaatgaaccttatgaagatttagaacaaatc
ggttattttggtttgattagggcgattgagcgctttgaccccagccaaggatatgctttt
agttcctttgctgtgccatatattcgcggtgagatgctgcattttttgcgcgatcgcagt
acgctattaaaaattccccgtcgttggcaagaactttacaatgaggggcaaaaggttcgc
aaagaattggcaatgactttgggacgtcctcccaaagacgctgaaattgccaagaggctc
cagatatctctacaagaatggcaagaaaccaagttagcggctcaaaatcgcatgcctttg
agtttagatgctaccgcagttcattatgttgactgccagataactttgggtgaggcgctt
ccttgtccccgttctcatattctccagcaacaagaagaagaacggcaacaactccaaggg
gcaatcagtctgttagaagataagccccgtatggcagttgagttggtatttttgaaggaa
ttttcccgcaaggatgctgctaagaagattggcaccagccccatgactgtaacgcggtat
ttgcaaaaaggcattcaagatctgatttgctatttgcaaccacagataatgccaacagga
tcatag
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