Cylindrospermum stagnale: Cylst_2878
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Entry
Cylst_2878 CDS
T02398
Name
(GenBank) carotene isomerase
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
csg
Cylindrospermum stagnale
Pathway
csg00906
Carotenoid biosynthesis
csg01100
Metabolic pathways
csg01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
csg00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
Cylst_2878
Enzymes [BR:
csg01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
Cylst_2878
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Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
HI0933_like
FAD_oxidored
Pyr_redox_2
Thi4
Pyr_redox
FAD_binding_3
GIDA
Motif
Other DBs
NCBI-ProteinID:
AFZ25071
UniProt:
K9WZ53
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Position
3358763..3360265
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AA seq
500 aa
AA seq
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MPPRTLFDAIVIGSGIGGLVTATQLAAKGAKVLVLERYLIPGGSAGYFERQGYRFDVGAS
MIFGLGDQGTTNLLTRALNAVNVSQESIFDPVQIHYHLPNGLDLKVDRVYEKFLQSLIAY
FPHEQKGIRRFYDECQQVFNCLNRIDLLSLEEPRYVMRVFFQHPLACLGLAKYLPQNVGD
VARRHIKDPQLLKFIDMECYCWSVVPANMTPMINAGMVFSDRHYGGVRYPKGGVGQIAQK
LADGLEKAGGEISYQARVTKIITEKGRAVGVQLANGKVYYGKRIVSNATRWDTFEKLLPA
DEMPVNEKNWQQRYQKSPSFLSLHIGVKASVLPTGTECHHILLEDWQKMAAPEGTLFVSI
PTLLDPDLAPAGYHIIHAFTPHWIDDWQKLSPSEYEAKKEQAAGRIIERLEQIFPGLDAG
LDYLEVGTPRTHRRFLGRADGTYGPIPRRKLRGLLGMPFNRTALPGLYCVGDSTFPGQGL
NAVAFSGFACAHRIAVDLGL
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgcccccgcgtactttatttgatgcgattgtaattgggtctggtattggtggcttagtc
acagcaacccagctagcagcgaaaggagctaaagttctggtgctggaacgttatctgatt
ccaggtggtagcgctggttattttgagcgccaaggttatcgatttgatgttggagcctca
atgatttttggcttgggagatcaaggcacaaccaacctactcacccgcgccttaaatgct
gtaaatgtcagccaagaatctattttcgatccagtgcagattcactatcatctgccgaat
ggattagatttgaaagttgaccgagtttatgaaaaatttttgcaaagtcttattgcttat
ttccctcatgaacaaaaagggattcgtcgtttttatgacgaatgtcagcaagttttcaat
tgccttaatcgcatagatttactgtcactagaagaacccagatatgtgatgcgggtattt
ttccaacatcctttagcttgtcttggtttggccaaatatttgccacaaaatgttggcgat
gtagcgcgacgccatatcaaagacccccagttattgaaattcatcgatatggaatgttat
tgctggtcagtagtccccgctaacatgacaccgatgattaatgctggcatggtcttttct
gacaggcattatggcggtgtccgctaccctaaaggtggtgtgggacaaattgcccaaaaa
ttagctgatggtttagaaaaagctgggggtgaaattagctaccaagcaagggtgacaaaa
atcattaccgaaaaaggtcgagccgtaggcgtgcaactggctaacggtaaagtttattac
ggtaaacgtatagtctctaacgctacccgctgggatacttttgaaaaattactaccagca
gatgaaatgccagttaatgaaaaaaactggcaacaacgttatcaaaagtcacccagtttt
ctgagtctacatatcggggtgaaggcgtcagttttgccaactgggacagaatgtcatcat
attttgctggaagattggcaaaaaatggcagcacctgaaggcactctttttgtttccatc
cccacattacttgacccagatttagcaccagcaggatatcacatcattcatgctttcacg
ccgcactggattgatgattggcaaaaactttcaccgagtgagtacgaagcgaagaaagaa
caagcagcagggcgaattattgagcgcttagagcaaatttttcccggtttggatgcgggg
ttggattatctggaagtaggaacaccgcgcacccatcgccgctttttgggtcgtgcagat
ggcacctacgggccaattcctcggcgcaagttgcgggggttattggggatgccatttaat
cgcacagcccttcctgggctttattgtgtgggggatagtacctttcctggtcaggggtta
aatgcggtggctttttctggcttcgcttgcgcccatcgcattgctgtagatttggggctt
taa
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