Cylindrospermum stagnale: Cylst_3024
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Entry
Cylst_3024 CDS
T02398
Name
(GenBank) pseudouridylate synthase I
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
csg
Cylindrospermum stagnale
Brite
KEGG Orthology (KO) [BR:
csg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csg03016
]
Cylst_3024
Enzymes [BR:
csg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Cylst_3024
Transfer RNA biogenesis [BR:
csg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Cylst_3024
Prokaryotic type
Cylst_3024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF6505
Motif
Other DBs
NCBI-ProteinID:
AFZ25195
UniProt:
K9WXV6
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All DBs
Position
complement(3489039..3489896)
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AA seq
285 aa
AA seq
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MLESCQLTPIHRVALVIQYLGTRFHGWQRQKAQRTVQEEIETAIATVLGHHVTLHGAGRT
DAGVHAAAQVAHFEATGLIPAHKWATILNGYLPHDILIRASASVDHRWHARFSAAYRRYR
YTLYTEDLPNLFVSQLSWHYYYAPLDESLIQAALKPLMGKHHLAAFHRAGSKRSHSWVEV
QAAECRRSGSFLHIEIQADGFLYGMVRLLVGMLVQVGSGQRTLASFTEIWKEQRREEVKY
AAPPQGLCLLRVGYPDFPLNREIWYDTLPQFVCPINIPGEYPLDD
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgttagaaagttgtcagcttacaccaattcatagagtagccttggtaatccaatacctg
ggcactcgctttcacggctggcaaaggcaaaaggcacagcgaacagttcaggaagaaata
gaaacagctatagctactgttctgggccatcatgtgaccctacacggcgctgggcgaact
gacgccggagttcatgccgctgctcaggtagcccattttgaagctacaggtttaattccg
gctcataagtgggcaacgattcttaacggctatctgccccacgatatattgatcagggct
tcagctagtgtagatcaccgttggcacgctcgctttagtgcagcctatcgacggtatcgc
tatacactctatactgaagatttaccgaacttgttcgtgagccaattaagttggcattat
tattatgcacccctggatgaatccttaatccaagctgcactaaaacctctgatgggaaag
catcacctggctgcttttcatcgtgcagggtcgaagcgatcgcattcttgggtagaggtg
caagcagcagagtgccgtcgcagtggttcatttctccatattgaaattcaggcagatgga
tttttgtatggcatggtgcgcctgttggtagggatgctggtacaagtaggttctgggcaa
cgcacgctggctagcttcaccgaaatctggaaagaacaacgccgggaagaagtgaaatat
gccgcgcccccccaaggactatgcttattgcgagttggctatccagattttcccttgaac
agagagatttggtatgacaccctgccacagttcgtctgtcctataaatattccaggagaa
tatcccctggatgattag
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