Cylindrospermum stagnale: Cylst_3693
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Entry
Cylst_3693 CDS
T02398
Name
(GenBank) seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
csg
Cylindrospermum stagnale
Pathway
csg00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
csg00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Cylst_3693
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
csg01007
]
Cylst_3693
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csg03016
]
Cylst_3693
Enzymes [BR:
csg01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
Cylst_3693
Amino acid related enzymes [BR:
csg01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
Cylst_3693
Transfer RNA biogenesis [BR:
csg03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Cylst_3693
Prokaryotic type
Cylst_3693
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
FrhB_FdhB_C
DUF848
APG6_N
MAD
Motif
Other DBs
NCBI-ProteinID:
AFZ25817
UniProt:
K9X246
LinkDB
All DBs
Position
complement(4193329..4194660)
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AA seq
443 aa
AA seq
DB search
MLVFWRKDTRLKIKEKSVLDLKQIRENTQLVQERLNGRSGKYDIQPILELDKKQRELEGT
RSQLQARSNEIGKIVGQKIKSGIEPQDPEIQALRDEGNSIKAKLSELEPQEKELKAEIHQ
KLLELPNLPSDATPIGKTEEDNQEIRRWGDEYLPQNPNILPHWEIGEKLGILNIERAVKV
AQSRFVTLVGAGAALERALIQFMLSLQTQAGYVEVSPPLLVNTESLTGTGQLPKFAEESF
KCAEDDLWLIPTAEVPVTNLYRGEILAAEDLPIYHCAYTPCFRREAGSYGRDMRGLIRLH
QFNKVELVKLVHPSSSFEELEKLVGNAEAILQALKLPYRVINLCTGDLGFSATKTYDLEV
WLPSSGKYREISSCSNCFDFQARRADIRFKEAGKKGTQFVHTLNGSGLAVGRTMAAILEN
YQQPDGTVLIPEALQVYLGREVL
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgctggtgttttggcgaaaagatactaggctaaaaataaaagaaaaatctgtgttggat
cttaagcaaattcgggaaaatacccaattagttcaggaacggttgaatggtcgtagtggt
aaatacgatattcagcccatattagagttagataaaaagcaacgggaactggaggggaca
cgcagtcaactccaagcccggagcaacgaaatcggtaaaatcgtcgggcaaaagatcaaa
tctgggatagagcctcaagacccagaaattcaagccttgcgggatgaagggaactcgatt
aaagctaaattaagcgaactggaaccgcaagaaaaagaactgaaagcggaaattcaccaa
aagttactagaactccccaatttgccaagtgatgctacaccaattggtaaaactgaggaa
gataaccaagaaatacgccgttggggggatgaatatctgcctcaaaacccgaacattctc
ccccattgggaaattggcgaaaagttaggtattctcaatattgagcgagccgtaaaagtt
gcccaaagtcgctttgtaacgttagtgggggctggtgcggctctggagagggcattaatt
caatttatgctatccctgcaaacccaagctgggtatgtggaagtcagtccaccactgtta
gtgaatactgaatctctcacaggaactggtcagttacccaagtttgcagaagaaagcttt
aaatgtgctgaggatgatttgtggttaataccaacagcagaagttcccgttaccaacctc
taccggggggaaattctcgctgctgaagatttaccaatttatcactgtgcttatactcct
tgtttccgtcgagaagcgggaagttatggacgggatatgcggggtttaattcgtctgcat
caattcaataaagttgagttggtgaaacttgttcatcctagttcttcttttgaggaacta
gaaaaattggtggggaatgcagaagcgattttacaagctttaaaattaccttatcgcgtc
atcaatttatgtactggtgatttaggtttttctgcaaccaaaacctacgatttagaagtt
tggctaccttcatctgggaagtatcgagaaatttccagttgctctaattgttttgatttc
caagcgcgacgggcagatattcgctttaaggaagcgggtaagaaaggtactcagtttgtc
cataccctcaacggttctggtttggctgtgggaaggacaatggcagcgattttggagaat
tatcagcaaccagatgggacagtgttgataccggaagcattgcaggtttatttgggaagg
gaggttttgtaa
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