Cylindrospermum stagnale: Cylst_3888
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Entry
Cylst_3888 CDS
T02398
Name
(GenBank) tRNA modification GTPase trmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
csg
Cylindrospermum stagnale
Brite
KEGG Orthology (KO) [BR:
csg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csg03016
]
Cylst_3888
Transfer RNA biogenesis [BR:
csg03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
Cylst_3888
Prokaryotic type
Methyltransferases
Cylst_3888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
GTP_EFTU
Ras
Roc
RsgA_GTPase
MMR_HSR1_Xtn
AIG1
Dynamin_N
Motif
Other DBs
NCBI-ProteinID:
AFZ26001
UniProt:
K9X1S8
LinkDB
All DBs
Position
complement(4402887..4404278)
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AA seq
463 aa
AA seq
DB search
MSELLANTGTIAAIATAIVPQQGSVGIVRVSGFHAMAIAQTLFDAPGRQVWESHRILYGY
IRHPQTQEIVDEALLLIMKAPRSYTREDVVEFHCHGGIMAVQQVLQLCLEGGARLAQPGE
FTLRAFLNGRLDLTQAESIADLVGARSPQAAQTALAGLQGKLAHPIRQLRANCLDILAEI
EARIDFEEDLPPLHINSIISEIDKIAADITKLLATKDKGELLRTGLKVAIVGRPNVGKSS
LLNAWSQSDRAIVTDLPGTTRDVVESQLVVAGIPVQVLDTAGIRETVDQVEKIGVERSRR
AANAADLVLLTIDAADGWTQGDEEIYTQVQHRPLILVINKIDLVQTALITSWEYPKTINQ
IVTTSASQNQGIDGLETAILEIVQTGKVQAADMDLAINQRQAAALTKAKISLEQVQATIT
DQLPLDFWTIDLRGAIQSLGEITGEEVTESVLDRIFSRFCIGK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaactgttggctaatactggaactatcgcggcgatcgcaactgctattgtccct
caacaaggtagcgtggggattgtgcgggtttctgggttccatgcaatggcgatcgctcaa
actctgtttgacgcaccagggcgtcaagtttgggaaagtcaccggattctttacggttat
atccgccatccccaaacacaagaaatcgtagatgaagctttgttgctgattatgaaagct
ccccgctcttacacccgtgaagatgtggtggagttccattgtcacgggggaattatggcg
gtgcaacaggtgttgcaactgtgtttagaaggtggtgcgcgattagcccaaccgggagag
tttaccctgcgggcgtttttgaatgggcgattggatttaactcaagccgaaagtattgcc
gatttagtgggagcgcgatcgcctcaagcggctcaaactgctttagctgggttgcagggg
aagttagctcatccgatccgtcagttacgcgctaactgtttggatatcttggcagaaatt
gaagctcggatagactttgaagaagatttgccaccattgcatatcaattccatcatatca
gaaatcgacaaaattgccgcagatattaccaagttattggcaactaaagacaaaggcgaa
ctgctccgcacagggttaaaagtggcgattgtcgggcgtccgaatgtggggaaatccagc
ttgttgaatgcttggagtcagagcgatcgcgcgatcgttacagacttacccggtacaacc
cgcgatgtggtggaatctcagctagttgtggcgggaattcccgtgcaggtactagataca
gcggggattcgggaaactgtagatcaagtagaaaaaatcggcgttgagcgatcgcgccgt
gcagctaatgcagctgatttagtcttgctcaccatcgacgccgcagatggttggactcaa
ggcgatgaagagatttatacacaggtgcaacaccgtccgttaattttagttattaacaaa
attgatcttgtgcaaacagctttgattacatcctgggaatatcccaaaacaattaaccaa
attgttaccacatcagcgtcacaaaatcaaggaattgatggcttagaaacggctatttta
gaaatagtacaaactggaaaagttcaagctgctgatatggatttagcgattaaccaaagg
caagccgcagcgttaacaaaagcgaagatttctttagagcaagtgcaagcgacaattacc
gatcagttaccattagacttttggacgattgacttacgaggtgcgattcagtcactagga
gaaatcaccggagaagaagtgacagaatctgttttggatcggattttcagtaggttctgt
attggtaaatag
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