KEGG   Cylindrospermum stagnale: Cylst_4338
Entry
Cylst_4338        CDS       T02398                                 
Name
(GenBank) bacterial nucleoid DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
csg  Cylindrospermum stagnale
Brite
KEGG Orthology (KO) [BR:csg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:csg03032]
    Cylst_4338
   03036 Chromosome and associated proteins [BR:csg03036]
    Cylst_4338
   03400 DNA repair and recombination proteins [BR:csg03400]
    Cylst_4338
DNA replication proteins [BR:csg03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    Cylst_4338
Chromosome and associated proteins [BR:csg03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    Cylst_4338
DNA repair and recombination proteins [BR:csg03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      Cylst_4338
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_2 DUF2267 Transposase_mut
Other DBs
NCBI-ProteinID: AFZ26430
UniProt: K9X1D3
LinkDB
Position
complement(4907146..4907430)
AA seq 94 aa
MNKGELVDAVAEKASVTKKQADAVLTAALETIIEAVSSGDKVTLVGFGSFESRERKAREG
RNPKTNEKMDIPATKVPAFSAGKLFRERVAPPKS
NT seq 285 nt   +upstreamnt  +downstreamnt
atgaacaagggtgaattagttgatgcagtagctgaaaaggctagcgttaccaaaaaacaa
gcggatgctgtcttaactgccgctttagaaacgattattgaggctgtttcctctggcgat
aaagtaacgctggtgggatttggctcttttgaatcacgggaacgtaaagctcgtgaaggc
cgcaacccgaaaaccaatgaaaaaatggatattccggcgacgaaggttcctgctttctct
gctgggaagctgtttagagaacgggtagcacccccaaaatcttag

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