Cylindrospermum stagnale: Cylst_4338
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Entry
Cylst_4338 CDS
T02398
Name
(GenBank) bacterial nucleoid DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
csg
Cylindrospermum stagnale
Brite
KEGG Orthology (KO) [BR:
csg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csg03032
]
Cylst_4338
03036 Chromosome and associated proteins [BR:
csg03036
]
Cylst_4338
03400 DNA repair and recombination proteins [BR:
csg03400
]
Cylst_4338
DNA replication proteins [BR:
csg03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Cylst_4338
Chromosome and associated proteins [BR:
csg03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Cylst_4338
DNA repair and recombination proteins [BR:
csg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Cylst_4338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
DUF2267
Transposase_mut
Motif
Other DBs
NCBI-ProteinID:
AFZ26430
UniProt:
K9X1D3
LinkDB
All DBs
Position
complement(4907146..4907430)
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AA seq
94 aa
AA seq
DB search
MNKGELVDAVAEKASVTKKQADAVLTAALETIIEAVSSGDKVTLVGFGSFESRERKAREG
RNPKTNEKMDIPATKVPAFSAGKLFRERVAPPKS
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagggtgaattagttgatgcagtagctgaaaaggctagcgttaccaaaaaacaa
gcggatgctgtcttaactgccgctttagaaacgattattgaggctgtttcctctggcgat
aaagtaacgctggtgggatttggctcttttgaatcacgggaacgtaaagctcgtgaaggc
cgcaacccgaaaaccaatgaaaaaatggatattccggcgacgaaggttcctgctttctct
gctgggaagctgtttagagaacgggtagcacccccaaaatcttag
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