Cylindrospermum stagnale: Cylst_4530
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Entry
Cylst_4530 CDS
T02398
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
csg
Cylindrospermum stagnale
Pathway
csg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Cylst_4530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csg03019
]
Cylst_4530
03016 Transfer RNA biogenesis [BR:
csg03016
]
Cylst_4530
Enzymes [BR:
csg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Cylst_4530
Messenger RNA biogenesis [BR:
csg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Cylst_4530
Transfer RNA biogenesis [BR:
csg03016
]
Prokaryotic type
tRNA degradation factors
Cylst_4530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
aRib
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
AFZ26608
UniProt:
K9X2E7
LinkDB
All DBs
Position
complement(5141682..5143838)
Genome browser
AA seq
718 aa
AA seq
DB search
MAEVDKSISFDGRDIRLKVGLLAPQAGGSVLIQSGDTAVLVTATRSQAREGIDFLPLTVD
YEERLYAAGRIPGGIMRREGRPPEKTILTSRLIDRPLRPLFPSWLRDDLQVIAFTMSMDE
QVPPDVLAVTGASIATLIAQIPFDGPMAAVRVGLVGDDFIINPTYAEIEAGDLDLIVAGS
PHGVIMVEAGANQLPERDIIEAIDFGYEAVRDLIKAQQDLMAELGLEIVQATPPEVDQTL
ANYIRDRASSEIKKILAQFHLTKPERDIALDAVKDAIATGLTELAEDDPIRVSATADKKA
LGNTFKEITKQFMRRQIVEDNVRVDGRKLDEVRPVSCQVGVLPKRVHGSGLFNRGLTQVL
STCTLGTPGDAQNLNDDMQLDQSKRYLHHYNFPPFSVGETKPMRAPGRREIGHGALAERA
ILPVLPSKEQFPYVIRVVSEVLSSNGSTSMGSVCGSTLSLMDAGVPILKPVSGAAMGLIK
EGDEVRVLTDIQGIEDFLGDMDFKVAGTDAGITALQMDMKISGLSLDVISQAIHQAKSAR
LHILEKMLQTIETPRTETSPYAPRLLTIKIDSDMIGLVIGPGGKTIKGITEETGAKIDIE
DDGTVTISAVDESKAKRARNIIQGMTRKLHEGDVYVGRVTRIIPIGAFVEFLPGKEGMIH
ISQLADYRVGKVEDEVAVGDEVIVKVREIDNKGRINLTRLGIHPDQAVAAREAAAVNR
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagttgataagtcaatatccttcgatggacgggatattcgactgaaggttggc
ctattagcgccccaagctggtgggtctgttctgatacaatcaggggatacagctgttttg
gtaacagctacgcgatcgcaagccagagaaggcattgattttcttccgctcacagtagat
tacgaagaaagactatatgcagctggtaggattcccggcgggatcatgcggcgtgaaggt
cgtccaccagaaaaaaccattcttaccagccgtctgatcgaccgtcccttacgccctctg
ttcccttcatggttgcgggatgacttgcaagttattgcctttacgatgtcaatggatgag
caagtaccacccgatgtcctagccgttactggcgcttcaattgctaccctgattgcccaa
attccctttgatgggccaatggcggcagtacgggttggcttggtgggagatgatttcatt
attaaccccacctatgcagaaattgaagccggagatttggatctgatcgtagcaggttca
ccgcatggtgtaatcatggtagaggcaggagccaatcagctgccagagcgagacattatc
gaggccattgattttggttatgaagctgtgcgggacttaatcaaggcgcagcaagaccta
atggcagaattgggtttggaaatagtgcaagcaacgccgccggaggtagaccagacactg
gcaaactatatccgcgatcgcgcaagcagtgagattaagaaaattctggcgcaatttcat
ttaaccaaacctgagcgagatattgctttggatgcagttaaggatgcgatcgctactgga
ctgactgaactagcagaagacgacccgattcgcgtttccgcaactgctgataagaaagca
cttggtaatacctttaaagagattaccaaacagtttatgcggcgtcaaatcgttgaagac
aacgttcgcgttgatggtcgcaaactggatgaagtccgtcctgtttcttgtcaagttggc
gttttaccgaagcgagtccacggcagcggtttatttaaccggggactaacccaggtttta
tctacctgcaccctcggcacaccgggagatgcccaaaacctcaacgacgacatgcaacta
gatcaatccaaacgttacctgcatcattacaacttcccgcctttttccgtgggagaaacc
aagccgatgcgggcaccaggcagacgggaaatcggtcacggtgccttagcagagcgagcg
attctgccagtgctaccatcgaaagagcaattcccctacgtaatccgcgtcgtctcggaa
gtgctttcttccaatggttccacctcgatgggttcggtgtgcggttccaccctgtctcta
atggatgctggcgtcccaattctcaaacccgttagtggtgcggcaatgggtctgattaag
gaaggtgacgaagtcagagtcctgaccgatattcagggcattgaagactttttgggcgac
atggacttcaaggttgccggcacagatgccggaattactgccttgcaaatggatatgaaa
atatccggtttgtctttggatgttatttcccaagctatccaccaagccaaatcagcccgg
ttacatattctggagaaaatgctccagactatcgaaaccccacggactgaaacctcacct
tatgctccccgtctgttgacgattaagattgattcagacatgatcggtctggtcattggc
cccggaggcaagacgattaagggcattaccgaagaaactggtgcaaaaattgacatcgaa
gatgatggcaccgtaacgatttctgctgtggatgaaagcaaagcgaagagagcgcgtaac
atcatccaaggcatgactcgcaagctgcacgaaggggatgtctatgtagggcgtgtaacc
cggattatacccattggtgcttttgtggaatttttgcctggaaaggaaggcatgattcac
atttctcaattagctgactaccgcgttggcaaagttgaggacgaagtcgctgtcggtgat
gaggtgattgtcaaggtgcgcgaaattgacaataagggtcggattaatctgacacgtttg
ggtatccacccagaccaagcggttgcagcgcgagaagcagcagcagtaaatcgttaa
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