Cylindrospermum stagnale: Cylst_5078
Help
Entry
Cylst_5078 CDS
T02398
Name
(GenBank) NusA antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
csg
Cylindrospermum stagnale
Brite
KEGG Orthology (KO) [BR:
csg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csg03021
]
Cylst_5078
03009 Ribosome biogenesis [BR:
csg03009
]
Cylst_5078
Transcription machinery [BR:
csg03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Cylst_5078
Ribosome biogenesis [BR:
csg03009
]
Prokaryotic type
rRNA transcription factors
Cylst_5078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
KH_NusA_C
KH_2
KH_1
Carb_kinase
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
AFZ27123
UniProt:
K9X3V6
LinkDB
All DBs
Position
complement(5766970..5768247)
Genome browser
AA seq
425 aa
AA seq
DB search
MSMVSLPGLKELIESISRERNLPRLAVQSAIREALLKGYERYRRAQNLERKQFDEDYFDN
FEVELDIEGEGFRVLSTKTIVEEVSNSDHQISLEEVQQVASEAQLGDSVVLDVTPDQGEF
GRMAAMQTKQVLAQKLRDQQRQMVQEEFQDLEGTVLQARVLRFERQSVILAVTSGFGQPE
VEAELPKREQLPNDNYRANATFKVYLKKVSQGQQRGPQLLVSRADAGLVVYLFANEVPEI
EDEVVRIVAVAREANPPSRYVGPRTKIAVDTLDRDVDPVGACIGARGSRIQVVVNELRGE
KIDVIRWSPDPATYIANALSPARVDEVRLMEPETRQTHVLVAEDQLSLAIGKEGQNVRLA
ARLTGWKIDIKDKAKYDYAGEDAKFAAARAKYQPEEDDFEEEELEDENQEELELEDDTFD
NSEDD
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatggttagtttacccggattaaaagaattaattgaaagtataagtcgggaaaga
aatttaccacgtctggcagttcaatcagctataagagaagcattgctcaaaggttacgaa
cgttatcgtcgtgcccaaaatttggagcgcaaacagtttgatgaagattattttgataat
tttgaagtagaactcgatattgaaggagaaggatttcgcgttctctccactaaaaccatc
gtcgaagaagttagcaattccgaccatcaaatttccctagaagaagttcaacaagtagct
tctgaagcccaattgggggactctgtggtactggatgtcactccagatcaaggggaattt
ggtcgcatggcggcgatgcaaaccaagcaagtactggcacaaaagctccgagatcaacaa
cgccagatggtgcaagaagagttccaagacttagaaggaactgttctacaagctagagta
ctgcggtttgagaggcaatctgtaattctggcagttaccagtggctttggtcagccagaa
gtggaagctgaattaccgaaaagggaacagttgcccaacgataattatcgggcaaatgcc
acctttaaggtatatctcaaaaaagtttcccaaggtcagcaacggggaccacagttgtta
gtgtctcgcgccgatgctggcttggtggtttatctgtttgccaacgaagtgccggaaatc
gaggatgaagtggtacggattgtagccgtagcacgggaagccaatcccccttcccgttac
gtaggccctcggactaaaatagcagttgataccttagatcgcgatgtagacccagttggt
gcttgtattggggcgcggggatcgcgcattcaagtggtagtcaatgaattgcgcggtgaa
aaaattgatgtgattcgctggtctccagacccagcaacctacattgccaatgccttgagt
ccagcacgggtggatgaagtccgcctcatggaaccggaaactcggcaaactcatgtacta
gtagctgaagatcaactaagtttagctattgggaaagaagggcaaaacgtccgattagca
gctcgcctgactggttggaaaattgacatcaaagataaagccaagtacgactatgcagga
gaagatgctaagtttgccgccgcgcgagccaaatatcaaccggaggaagatgattttgaa
gaggaggaactagaggatgaaaatcaggaagaactagaattagaggatgacacttttgac
aatagcgaggacgattaa
DBGET
integrated database retrieval system
