Cylindrospermum stagnale: Cylst_5113
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Entry
Cylst_5113 CDS
T02398
Name
(GenBank) pseudouridine synthase family protein
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
csg
Cylindrospermum stagnale
Brite
KEGG Orthology (KO) [BR:
csg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csg03009
]
Cylst_5113
Enzymes [BR:
csg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
Cylst_5113
Ribosome biogenesis [BR:
csg03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Cylst_5113
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
NikR_C
SYY_C-terminal
COR-B
Motif
Other DBs
NCBI-ProteinID:
AFZ27158
UniProt:
K9X3Y8
LinkDB
All DBs
Position
complement(5802961..5803731)
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AA seq
256 aa
AA seq
DB search
MEARLQKILAQWGIASRREAEEMIRQSRVRINGVLANLGQKVDPQRDTIAVDGKPVSEKP
RPALIYLLLHKPAGVVSTCYDPQGRPTVLDLLPKELQQGSGIHPVGRLDANSTGALILTN
DGDLTFGLTHPSHSISKTYHVLVKGHPPEAVLEKWRQGVVLEGRKTRIAGVSLIERDAEQ
SCLEIILQEGRNRQIRRVAQQLGYPVIKLHRTALGSIQLQTPKAPFLQEGDYRSLTKDEI
SFLQKQLTPNTYERFS
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggaggcacggttacaaaaaattcttgctcaatggggcattgcctcacgtcgtgaagcc
gaagaaatgattaggcaatcacgggtgcggatcaatggagtattggcaaatttaggtcaa
aaagttgatccccaaagagatacgatcgccgtcgatggtaaaccggtgtctgaaaagccc
cgtccggctttaatatatctgttgctgcataaaccagcgggagtggtttccacctgctac
gatccccagggaagaccgacagttttggatctactaccgaaagaattacaacagggttca
ggtattcatcctgttgggcgtttagacgccaactctacaggagcattaattctgaccaat
gacggagatctcacctttggactcacccatcccagccatagcatctctaagacgtaccat
gttttggttaaaggacatccgccagaagcagtactggagaaatggcgtcagggtgtggta
ttagaagggagaaaaacacgcattgcaggcgtgtccctgattgaacgtgatgccgagcaa
agctgtttagaaattattttgcaggagggaagaaatcgccagattcgccgtgtagctcaa
cagttaggatatccagtaatcaagctgcatcggactgctctcggttcaattcaattacaa
acgccaaaagcaccctttttacaggagggtgactatcgttccctgacaaaagatgagatt
agctttttacaaaagcaattaacgcctaatacctatgaaagattcagctaa
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