Cylindrospermum stagnale: Cylst_5348
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Entry
Cylst_5348 CDS
T02398
Name
(GenBank) bacteriocin-processing peptidase
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
csg
Cylindrospermum stagnale
Pathway
csg02010
ABC transporters
csg03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
csg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Cylst_5348
03070 Bacterial secretion system
Cylst_5348
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csg02000
]
Cylst_5348
02044 Secretion system [BR:
csg02044
]
Cylst_5348
Transporters [BR:
csg02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Cylst_5348
Secretion system [BR:
csg02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
Cylst_5348
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
ABC_tran
cNMP_binding
SMC_N
Peptidase_C39_2
AAA_22
Peptidase_C70
AAA_16
NB-ARC
AAA_29
Mg_chelatase
RsgA_GTPase
SbcC_Walker_B
DUF3335
Guanylate_cyc_2
nSTAND3
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
AFZ27373
UniProt:
K9X4H3
LinkDB
All DBs
Position
complement(6036236..6039292)
Genome browser
AA seq
1018 aa
AA seq
DB search
MQKAFSPQHLAEQLAQLLGESLSNREKDICVKAVEIVEPPVAKQFWQATAANPGLYLVLA
GKVRLLDSSNNLITTLSPGASFGELTLFPEENFIPYVARASANLKLCYLHQEVLQELFSS
SSNIRLRLLTRAELWDALLLCCQNSRLPQNGSAESMFKALSLFERHNLESGSLNAKLTKD
TKLWLLRRGELLYSDGRTLTPGDIYVNPQQGSWQATQPTIAYSLRHGDWQTALQHWPQLA
ELSDFSERQTAAVVEQNVQVKRNIIPFPQATPSLPPQPKPNKRRAYFPNPKVSAGHWWQR
VTKRYPFFAQQSASDCGAACLVMISRYWGKNLSVNRLRDLANVSRSGSSMRSLTSAAESI
GFATRPVKASFDKLAQQPLPAIAHWQGKHYIVVYEINKKRVIVGDPAIGQCTLTAGEFKA
GWTGYALLLQPTSSLKETPEANTPFWQLFDLVKPHSQVLLEVFVASVLIQVFGLVTPLFT
QLLLDRVIVQGSVLTLNAVGFGLLIFGLFRIAINGLRQYLLDHTANRIGVALLVGFIKHT
FRLPLSFFESRYVGDIVSRVQENQKIQRFLTGEALSICLDLLTVFIYLGLMFWYSSALAW
LTLMILPPYLLLAVIATPFLRRLNREVFTAGANENSYLIQALTGVASIRSMAIEQTVRWH
WEELLNTLTKKSFSGQVIGNQLQILSATIQSVANTGLLWFGAWLVIQNQLTIGQLVAFNM
LLGNVIQPFQRLIVLWNQLQEVVISTERINDILEAEPEEDLEHQPRQSLPRLRGKISFDN
VTFRYHAESEINVLENLSFEVKPEQTVAVVGRSGSGKTTLSKLILGLYPPTDGKVLIDNQ
DVTSISLRSLRSQIGVVDQDTFLFGGTIRENISIAHPEATLEEITEAARLAGADEFIQRM
PMGYETQIGEGGGMLSGGQRQRLAIARALLGNPRLLVLDEATSHLDSESERIIQTNLKKI
LQGRTSLIIAHRLSTVRHADLILVLDRGLLVESGTHEELISKRGHYFYLNQQQLAQTG
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaagcgttttccccacaacatttggctgaacaactcgcccaactcttgggtgag
tcgttgtcaaacagggaaaaagacatctgtgtcaaagcagtagaaattgttgaaccaccg
gtagccaaacagttttggcaagcaacagcagcgaatccgggactttatctcgtgcttgcg
ggtaaagttagactgctggatagctctaataacttaatcactaccctttcgccaggggca
tcatttggcgagttgacgctgtttcccgaagagaatttcattccctatgttgccagagct
tctgcgaatttaaagctctgctatcttcaccaagaggtgttgcaagaactatttagctca
tctagcaatattcgcttacgcctgctcaccagggcagaactttgggatgcactgctgtta
tgttgccaaaactcccgattgccgcaaaatggctccgccgagtcgatgttcaaagcacta
tccctatttgagcgccacaatcttgaaagtggttctctcaatgccaaactcaccaaagat
accaagctctggctgctacgtcggggtgaactactatactctgacgggcggacgttaaca
ccaggagacatttatgtaaatcctcaacaggggagttggcaggcgacacaaccaacgatc
gcttatagtttgcgtcatggcgattggcaaacagcactgcaacactggccgcaattagca
gagttgagcgactttagtgaacgccaaaccgccgctgttgtcgaacaaaatgtccaagtc
aagcgcaatattattccctttccccaagcaactccctcgctaccaccacagccaaaacca
aacaaacgacgagcttactttcccaaccctaaggtgagtgcgggtcattggtggcaacgt
gttactaagcggtatccattctttgcccaacaaagtgcttctgactgtggggcagcttgc
ttggtgatgattagtcgctattggggcaaaaacttaagtgtgaatcggctgcgggattta
gccaacgtcagccgcagcggttcatcaatgcggagtttaacatcagcggcagaaagcatc
ggctttgctacccgtccggtgaaagctagctttgataaattggcacaacaacccctacct
gcgatcgcgcattggcaaggcaaacactatatagttgtctacgaaatcaacaaaaaacgg
gtgattgttggcgaccccgctatcggtcaatgcaccctgactgctggggaattcaaagct
ggttggactggttacgcgttgttattgcaacccacaagctcactcaaagaaaccccagaa
gcaaatacaccattctggcagttgtttgatttagtcaaaccccactcccaggtgttgcta
gaagtgtttgttgcttcggtgttgattcaggtgtttggacttgttacacccctatttacc
caacttttattagacagagtaattgttcagggtagtgttctgacattaaacgctgttggt
tttgggttgctgatttttgggttgtttcgcatcgcgatcaacggactgcggcaatatttg
ctagatcacacagctaaccgcatcggcgtagcgctgttggtaggttttatcaaacatacc
tttcgtttacctctttctttctttgagtcgcgttacgttggcgatattgtttctcgcgtc
caagaaaatcaaaaaattcagcgcttcctcaccggggaagcactatctatttgtttggat
ttgctgacagtatttatctatttggggctaatgttttggtacagttcagcattggcctgg
ctgactttaatgatcttaccgccttatctgctgctggcagttattgccacaccttttttg
cgccgccttaaccgcgaagtttttactgctggagccaatgaaaatagttatctgattcaa
gctttgacaggggttgcttctatccgctcaatggctattgaacagacggtgcgctggcat
tgggaagaactgctgaatacattaacgaaaaaaagctttagtggccaggtaattggcaat
caattacaaattcttagcgccacaattcaatctgtagcgaatacaggtttactgtggttt
ggggcgtggctagtaattcaaaaccaactgacaattgggcagttagttgctttcaatatg
ttgttaggtaatgtgattcagccttttcagcggttaatagttctgtggaatcaattgcag
gaagtggtaatttctacagagcggattaatgatattttggaagcagaacctgaggaagat
ttagagcatcaaccacgtcagtctttacccaggctacgcggtaaaattagttttgataat
gtcactttccgctatcacgcagaaagtgagattaatgtgctggaaaatctgagctttgaa
gtcaagccagagcaaactgtagcagttgtggggcgtagtggttctggtaaaaccactctt
tctaaattgattttgggtctgtatccgccgacggatgggaaggtattaattgacaatcaa
gatgtaactagtatttctttgcgctcgctgcgatcgcaaattggggttgtcgatcaagat
acctttttgtttggcgggacaattcgcgaaaacatcagcattgctcatccggaagccact
ctagaagaaattacagaagcggcgcgtctggcaggagcagatgaatttattcagcgcatg
ccaatgggttacgaaacccaaattggtgaaggtggggggatgctctctgggggacaacgc
caacgtttagcgatcgcgcgggcgttgttaggcaatccccggctattggttttagatgaa
gcgacaagtcacctagattctgaatctgagcggattattcagactaacctcaaaaaaatt
cttcaagggcggacaagtctgattattgctcatcgtctttctacggtgcgtcatgctgac
ctgattttagtgttagatcgcggactcttagtggaaagcggcactcacgaggaattaatc
tccaaacgaggtcattatttctatctcaaccagcaacagttagcgcaaacaggttga
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