Cylindrospermum stagnale: Cylst_5548
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Entry
Cylst_5548 CDS
T02398
Name
(GenBank) DNA-binding domain-containing protein, AraC-type
KO
K07506
AraC family transcriptional regulator
Organism
csg
Cylindrospermum stagnale
Brite
KEGG Orthology (KO) [BR:
csg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csg03000
]
Cylst_5548
Transcription factors [BR:
csg03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Cylst_5548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
AFZ27557
UniProt:
K9X7E4
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All DBs
Position
complement(6236959..6237867)
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AA seq
302 aa
AA seq
DB search
MPEEKIVTVDFDQEDACSAILPRSPLVSSYHAKWAGIRLDHHRQPSHETPEHYFHQHTIG
ISLDRGIKKAERVLNGLTQRESIAHGDVTVIPANTHHISRCESGGEFILLSLEPAFFNRI
ALETVDLQNIEITPHFFTPDPLIQQIGLALKSELESDDMGTRIYIESLANTLCIHLLKRY
GADQKNIPQYTHGKGLSRLKLQQAMEYIHDNLDKDLSLAEISAVVSMSMYHFSRLFKQST
GFAPHQYVINCRIEKAKILLTRSEKTIDQIYQLVGFQNQSHFTNVFRKLMGTTPKVYREQ
VR
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgccagaagaaaaaattgtcactgttgattttgatcaagaagatgcttgttcagccatt
ctgccgcgatcgcccctagtttctagttaccatgctaaatgggctggtattcgcttagat
catcatcgacagcctagccacgaaacacccgaacactacttccaccaacatactattggc
atcagcctcgaccgtggtattaaaaaggcagagcgggtgttaaatggacttactcagcgt
gaatccatagcccatggggatgtgacagtgattccggcaaacactcaccatatatcgcgt
tgcgagtcggggggagaatttatcctcctcagtttagaaccagcttttttcaatcgcatc
gctttagaaacagtagatttacaaaatattgaaattacaccccatttttttacacccgat
cctctaattcagcagattggactggcactgaaatcagaactagaatctgatgacatgggt
actcgcatttacattgaatctctggcaaatacgctttgcattcacctgctgaaacgctat
ggcgcagatcaaaaaaatattcctcaatacactcatggtaagggtttgtctcggctaaag
ttgcaacaagccatggaatatattcatgataacctcgacaaagatttgtccttggcagaa
atttctgcggtggtgagcatgagtatgtatcatttttcgcgcctgtttaaacagtcaacg
ggttttgcgcctcatcagtatgtgatcaattgtcgaattgaaaaagccaaaattttattg
actcgctctgaaaagacaatagaccaaatctatcaactagtgggttttcagaatcagagc
cactttacaaatgtctttcgcaaattgatgggtacaacgcctaaagtctacagagaacag
gtaagatag
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