Cylindrospermum stagnale: Cylst_6514
Help
Entry
Cylst_6514 CDS
T02398
Name
(GenBank) transposase family protein
Organism
csg
Cylindrospermum stagnale
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DDE_Tnp_ISL3
Zn_ribbon_ISL3
HTH_7
BRK
HTH_29
Motif
Other DBs
NCBI-ProteinID:
AFZ28293
UniProt:
K9X726
LinkDB
All DBs
Position
pCYLST.01:143327..144988
Genome browser
AA seq
553 aa
AA seq
DB search
MSVLTHLLPDSTNLKLENCQVDKIKTQIKLIVSAIRTVVNCPVCNQPTHKIHSRYERKLT
DLPWADYSITLQLRVRKFYCINTLCKRRIFTERLTSVTAPWARRTLRLAQRLSAIGLANG
GEAGVRLSEQLGLTVSRNTLLKLVRSIPLPPIVTPQTLGVDDFCFRKCKTYGTALIDLER
SRPIALLKDAKAEILAEWLKAHPGVKVVSRDRSKTYESGIRQGAPEAIHVADRFHLLQNL
AETLNQVFATNHQALKAVDEAYSLSSVIQTDGTVVVRVPRPSREQQALQLTERNHARRLA
IHQQVWDLHDQGWSAKAIACQVGIGVTSVFRYLRTPTFPEPTRRRSRGRSILVPYQEYIL
KRWDEGCYEGLALFEEIQKLGYKGSYDTVARYTRRIRTVQGIKPRKRYSVKSLPKVTQPK
KLCLTPRRAVWLVLRNPDSQQPEDEELIALLIGQHPDLAEAIKLAQGFAQIVRQRLPQQL
QRWLTVAESSNLTAFHRFAKRLREDYDAVKAGVTMSVSNGPVEGHINRLKMLKRQMYGRA
KIDLLERRFLLAI
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtgctaactcacctactaccagattcaaccaatctgaaacttgagaattgccaa
gtagacaagataaaaactcagataaagttgattgtttccgcaatcagaacagtagttaat
tgcccagtttgtaaccaacctactcacaaaattcatagccgctacgaacgcaagttaaca
gacctaccttgggctgattacagtattaccctacagttgcgagtgcgaaagttttattgc
attaacactttgtgtaaacggcgcatttttaccgaaagactgacaagtgtgaccgcacct
tgggcgcgaagaactctacgtttagctcaaagactgagtgcaattggtttagctaatggt
ggggaagctggggtaagactctcagagcaattggggttaacagtctctcgcaacacgcta
ttaaaattagtccgctcaatcccacttccgccaatcgtaacgccgcagactcttggagta
gacgacttctgttttcgtaaatgtaaaacttacggcacagcactaattgacctagaacga
agccgaccaattgctctactcaaagatgcaaaggctgaaatcttagcagaatggttaaaa
gcacaccccggtgtcaaagtcgtttcacgagatcggtcaaaaacttatgaaagtggtatt
cgccagggcgcgcctgaagccattcacgttgcagaccgttttcacttattgcagaactta
gctgaaacacttaaccaagttttcgctacgaatcatcaagctctcaaagccgtcgatgaa
gcatacagtctttcatcagtaatccaaaccgatggtactgtagttgtgcgagtaccacgg
ccaagccgcgaacaacaggcactacaattaacagaacgaaaccatgcaagaagacttgct
atccatcagcaagtttgggacttacatgatcaaggttggagtgcaaaagctatagcctgt
caagttgggattggtgttacaagtgtattccgctatctacgtactcccacctttccagaa
ccaactagacgaagaagccgaggtcgaagtattttagttccgtaccaggaatatatcctt
aaacgctgggatgaaggttgttacgaaggtttagccttgtttgaggaaattcaaaaactg
ggttacaaaggtagctatgatacagtagcccgttacacgcgacgcatccgtactgtccaa
ggaatcaagccacgaaaacggtattcagttaagtctttaccaaaagtcactcaacccaaa
aaactttgtctgacacctcgtcgtgcagtatggctagtgctacgcaacccggattcgcaa
cagccagaagatgaagaattgattgcgctactcatagggcaacatccagatttagccgaa
gccatcaagttagctcaaggtttcgctcaaattgtgcgtcagcgactgccccaacaactc
caacggtggctaactgttgcagaaagtagtaatttgactgcttttcatcgctttgctaaa
cgattgcgtgaagattacgacgcagtgaaggcgggtgtaactatgtcagttagtaatggc
cccgttgaaggacatattaatcgactgaaaatgttaaaacggcagatgtatggtcgtgcc
aaaatagacctacttgagcgaagatttttgttggctatttga
DBGET
integrated database retrieval system
