Cylindrospermum stagnale: Cylst_6581
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Entry
Cylst_6581 CDS
T02398
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
csg
Cylindrospermum stagnale
Pathway
csg03030
DNA replication
csg03430
Mismatch repair
csg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Cylst_6581
03430 Mismatch repair
Cylst_6581
03440 Homologous recombination
Cylst_6581
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csg03032
]
Cylst_6581
03400 DNA repair and recombination proteins [BR:
csg03400
]
Cylst_6581
Enzymes [BR:
csg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Cylst_6581
DNA replication proteins [BR:
csg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Cylst_6581
DNA repair and recombination proteins [BR:
csg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Cylst_6581
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
EppA_BapA
Motif
Other DBs
NCBI-ProteinID:
AFZ28352
UniProt:
K9X9L8
LinkDB
All DBs
Position
pCYLST.01:complement(224273..225226)
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AA seq
317 aa
AA seq
DB search
MIVLLTGDDQHAIQEQLNQYKAEIDAQWLTLCYHRFSDDKLDKAMSVARTRSLTDGKKLV
IVENCRLKQWGDPELETLQQLVQVPDSTILVFVATNVDKRLKIYKHLVKYAKSFEFSLIP
LWRNDLIEKAIAIQAQKLKLLLSEDAVEYLAQAIGNDMTRAASELRKLSIYAHGRKLELA
EINELVPCQTQNSLQLAAAMREGKSHQVLQLLDDLLSRCEPLMVIVSTLLTQFRTWLWVK
SAIVSGVKKDGELAQLCSISNPHRIYYLRQEVANTSINALARAVSMILDLEMSIKRGAEG
KDLLPAILNVSRLFKLV
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgatagtcttgctcacaggtgatgaccaacacgctattcaggaacagttaaaccagtac
aaagcggagattgatgcccaatggctgacactatgctatcaccgattttcagatgataag
cttgacaaagccatgagtgtagctcgcactcgttccctcactgatggtaaaaaactggta
attgtggaaaattgccgcctcaagcaatggggtgatcctgagttagaaactttgcagcag
ttggtgcaagtgcctgattctacgattttggtgtttgttgctactaatgtagataagcgg
ctgaaaatttacaaacacctggtcaagtatgcgaagtcgtttgagttttcgttgatacca
ctttggcggaatgatttgattgaaaaggcgatcgctattcaagctcaaaaattgaaactg
ctgctgtcagaggatgcagtggaatatttagcacaagcgattggtaacgatatgacccgt
gcagcttctgagttacgcaaactttctatttatgctcatggcagaaaattagagcttgcg
gagatcaacgaattagtgccatgtcaaactcagaatagcctacaattggcagcggctatg
cgtgaaggaaaaagccatcaagttttgcagttgttggatgatttactatctcgttgtgaa
cctttaatggtgattgtcagcactcttttaacgcaatttagaacttggttatgggtgaag
tctgcgatagtttctggggtgaagaaggatggtgaattagctcaattgtgcagtatcagc
aatcctcatcgtatttactatttgcgtcaggaagtagcaaatacaagtatcaatgctttg
gctagggcggtgtccatgattttggatttggaaatgtctattaagaggggtgctgaaggt
aaggatttactaccagcaattcttaatgttagcaggttatttaagttagtttaa
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