Clostridium saccharolyticum WM1: Closa_0006
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Entry
Closa_0006 CDS
T01288
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
csh
Clostridium saccharolyticum WM1
Brite
KEGG Orthology (KO) [BR:
csh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csh03032
]
Closa_0006
03400 DNA repair and recombination proteins [BR:
csh03400
]
Closa_0006
Enzymes [BR:
csh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Closa_0006
DNA replication proteins [BR:
csh03032
]
Prokaryotic type
DNA Topoisomerases
Closa_0006
DNA repair and recombination proteins [BR:
csh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Closa_0006
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
crAss001_48
Motif
Other DBs
NCBI-ProteinID:
ADL02649
UniProt:
D9QZV0
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Position
6296..8857
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AA seq
853 aa
AA seq
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MEPNIFDKVHDVDLKKTMEKSYIDYAMSVIVSRALPDVRDGLKPVQRRVLYSMIELNNGP
DKPHRKCARIVGDTMGKYHPHGDSSIYGALVNLAQEWSTRYPLVDGHGNFGSVDGDGAAA
MRYTEARLSKISMEMLADINKDTVDFSPNFDETEREPDVLPSRYPNLLVNGTSGIAVGMA
TNIPPHNLREVISAVVHIIDNQVEENRETTMEEILEIIKGPDFPTGATILGKRGIEEAYR
TGRGKIRVRAVSDIEAMANGKNRIIVTELPYMVNKARLIEKIAELVKDKKVDGITDLRDE
SDRSGMRICIELRRDANANVVLNQLIKHTQLQDTFGVIMLALVKNSAGVLEPKVLNILQM
LNYYLDHQKEVVTRRTRYDLNKAEERAHILQGLLIALDNIDEVIRIIRGSENVQAAKAEL
MSRFGLSDVQSQAIVDMRLRALTGLEREKLENEYRELEARIAELKSILADEKKLLGVIKE
EISIISAKYGDDRRTSIGFDEFDMSMEDLIPDESTIVAMTKLGYIKRMSVDNFKNQNRGG
RGIKGMQTIDQDYIEDLMMTTTHHYLMFFTNTGRVYRLKTYMIPEGSRTSRGTAIVNLLQ
MLPGESITAIIPMKEYDDDKFLFMATRNGMVKKTPMMEYANVRKNGLQAIVLRENDELIE
VKATDDTKDIFLVTKKGQCIRFHEKDVRITGRVSMGVIGMKLNEDDQVVGMQKESQGPKL
LIVSANGMGKRTPIEEFTPQRRGGKGVLCYKITEKTGDIVGAKLVEDDHDLLLITTEGIV
IRISVNDISVIGRNTSGVKLMNIDQDSDITVASIAKVRDDGSKSDGEGLEELDIIDEELP
EEIKEMEDAPEEE
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggaaccaaatatctttgataaagttcatgatgtggacctaaaaaagaccatggaaaaa
tcgtatatcgattatgccatgagcgtcattgtttccagagccctgcctgatgtaagagac
ggtttgaagcccgttcagcgtagagtcctgtattccatgatagagctcaacaacggtccg
gataagccacaccgtaaatgtgcccgtatcgtcggtgataccatgggtaagtaccatcct
catggcgacagctctatttacggagccctggtgaatttagcacaggaatggtcaaccaga
tatccgttggtggatggacatggaaacttcggttccgtggatggagacggcgcagcagcc
atgcgatatacggaagcacgcttaagtaagatttccatggaaatgcttgcggacatcaac
aaagataccgttgatttcagtcctaactttgatgagacggaacgggaaccggatgttctt
ccgtcccgctatcccaatcttctggtcaacggaacctcaggcatagccgttggtatggcc
accaatatccctccccacaatttaagggaggtcatcagcgcggtggttcatattattgac
aaccaggtggaggaaaacagggaaaccaccatggaggaaatcctggaaatcatcaaaggt
ccggatttccccacaggagcaaccatcctgggaaaaaggggaattgaagaagcataccgc
acaggaagaggaaaaatccgtgtcagggctgtcagcgatattgaagccatggcaaacgga
aaaaaccggatcattgtgaccgagcttccttacatggtcaataaggcccgcctcattgaa
aagatcgcggagcttgtgaaggacaaaaaggtagacggcattaccgacttaagagatgag
tccgaccgttccggaatgaggatctgtattgagcttcgacgggatgccaatgccaacgtt
gtacttaaccagctgatcaagcacacccagcttcaggatacctttggggtaatcatgctt
gcccttgttaaaaacagtgccggcgttctggagcctaaggtcttaaatatactgcagatg
ctgaattattatctggatcaccagaaagaagtggtgaccagaaggacccgttacgatttg
aataaggcggaagaaagagcccatattttacagggtctgctgattgccttagataatatc
gatgaagtcatcagaatcatcaggggttctgaaaatgtccaggcagccaaggcagaactt
atgagccgtttcggcttaagcgatgttcagtctcaggccatcgtggatatgcgtttgaga
gctcttaccggtttggagagggagaagcttgaaaacgaatacagggagctggaagccaga
attgcggaattaaaatccatccttgctgatgagaaaaagcttttgggagtgattaaggaa
gaaatctccatcatttccgcaaaatacggagatgacagaaggacctccattggctttgat
gaattcgatatgtccatggaagatttaattcccgatgaaagtaccattgttgccatgaca
aaactgggatatattaagaggatgtctgttgacaacttcaaaaaccagaaccggggcggc
agaggaatcaaaggaatgcagaccattgaccaggattacattgaagacctgatgatgaca
actacccatcattacctgatgttctttaccaatacaggccgggtttaccggttaaagacc
tatatgatcccggaaggaagcagaacctccagaggaaccgccattgtaaaccttcttcag
atgcttccgggtgagagtattacggccatcatccctatgaaggaatatgatgatgacaag
ttcttattcatggctaccagaaacggaatggtaaagaaaacacctatgatggaatatgcc
aatgtccgtaagaacggtcttcaggccattgtacttcgggaaaatgatgagctgattgag
gtaaaggccaccgatgatacaaaggatattttcctggtaacgaaaaagggacagtgtatc
cggttccatgaaaaggatgtccgtattaccggccgtgtatccatgggtgttatcggcatg
aagcttaatgaggatgaccaggtagtaggcatgcagaaggaatcccagggaccaaaactt
ttaatcgtatccgccaacggcatgggcaagcgtactccgattgaggaatttactccccaa
agaagaggcggaaaaggcgttctctgctataagattacggaaaaaaccggagatatcgta
ggagccaagctggtcgaagatgaccatgacctccttctgatcactactgaaggaattgtc
atccgtatttccgtcaatgacatttccgtcatcggaagaaatacctcgggagtgaaactg
atgaacattgaccaggattctgatattaccgttgccagcattgccaaggtgcgggatgat
ggaagcaagtctgatggagaaggtttggaagaactggacatcatagatgaagagctgccg
gaggaaatcaaagagatggaagatgctccggaagaggaatga
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