Clostridium saccharolyticum WM1: Closa_0105
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Entry
Closa_0105 CDS
T01288
Name
(GenBank) Heparinase II/III family protein
KO
K20525
oligo-alginate lyase [EC:
4.2.2.26
]
Organism
csh
Clostridium saccharolyticum WM1
Brite
KEGG Orthology (KO) [BR:
csh00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
Closa_0105
Enzymes [BR:
csh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.26 oligo-alginate lyase
Closa_0105
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GFIT
Motif
Pfam:
Hepar_II_III_C
Alginate_lyase
zf-C2H2_6
Motif
Other DBs
NCBI-ProteinID:
ADL02748
UniProt:
D9R0U9
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Position
120832..122736
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AA seq
634 aa
AA seq
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MKYVNERFYERMNGEARNRELIQEMKREVDEFLPDFSDSPDRLSRWGHCYFCDDDGGRLI
FDINSPDRHRCEVCKKVYESEILDGVWVYFYRNKAVIMALVSAFVYKATKEKKYFDYSVS
VMEYYAHHYKEFLLHNKENLTADSYDEMPWGCGRMMPQGLNESIVAIRFIQTIEILRDEL
SPEFLDLVYHNMFREMYFLLAPQATRIHNISCWNLSAIGVMGLAFQDQEMIDFAFTSEYN
IRKQLETGVTKDFFWYEGSIHYNFFLLEGITYLLLFSKVYGYDFGETGTEILQNMFVQAY
NYAFDNQFLPNPNDGWPNLNLRTFSYIYHTAARAMGEDSPIGNLVKNIEASGSVRTPLPL
SEPYYCKNSVCLEQLLFNIDFDYEQFTPVKQQSNNFPESNFVILRYDKWNGFMKYGLNGK
SHAHPDIMNVELMYGNHRISRDLSNAGYRSRLCNEWHRKTLSHNTVCWNGMDITSVSPGE
CLFFDKNKVTAAARDVYDGIHYTRTIQISGNTFTDDFLVESGRNGTFDYVFHLESALHLE
YDLDLEDGNLGFEKNGYQHILETKRVKTKENHVVLRAGAEDVMWSIWIDLTGGHQLYLLK
TLDNPVNQRRNTILLRNTGTSPHYHLKIMAEDKQ
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgaagtatgttaatgaaagattttatgaacggatgaatggagaggccaggaaccgggag
ttgatacaggaaatgaaaagagaggtagatgagtttctgcctgatttttctgactctccg
gaccggttaagccgttgggggcactgctacttttgtgacgatgacggaggaaggctgatt
tttgatataaactcccctgacaggcatcggtgtgaagtgtgcaaaaaggtgtatgaaagt
gagattttagatggcgtttgggtttatttttaccggaacaaagcggtgatcatggcgctg
gtatctgcatttgtttataaagccacaaaggaaaagaaatattttgactattctgtatca
gttatggaatattacgcccatcattataaggagtttctgctgcataacaaagaaaatctg
accgcagattcttatgacgaaatgccctggggctgcggaagaatgatgccccaagggctg
aatgaatccattgtcgccatacgttttatccagaccattgagatcttaagagatgaatta
agtccggaatttcttgatctggtgtatcacaatatgttccgggaaatgtattttctgctg
gcccctcaggccaccagaattcataatatcagctgttggaatctgtccgctatcggtgtt
atggggctggcattccaggatcaggagatgatcgattttgcgtttaccagtgagtacaat
ataagaaaacagcttgaaacaggagtgacgaaagactttttctggtacgaaggatccatt
cattataatttctttttgctggaaggcattacgtatctgcttttgttcagtaaggtttac
ggttatgattttggtgaaaccgggactgaaattttgcagaatatgtttgtacaggcatac
aattatgcatttgacaatcaatttctgcccaatcccaacgatggctggcccaatctgaat
ttacgcacattcagttatatttaccatacggctgccagggcgatgggagaggacagcccg
atcggcaatcttgtgaagaacattgaagcgtccggttccgttcgtacgcctttgcctttg
tcagagccatattattgcaaaaacagcgtttgtctggaacagcttctgtttaacattgac
tttgattatgagcaattcacaccggttaagcagcagtcaaacaactttcctgaatccaat
tttgtaatattgagatatgacaaatggaacgggtttatgaaatatgggctaaatgggaaa
tcacacgcccatccggacatcatgaatgtggaactgatgtatgggaatcacagaatatcc
agggacttgtcaaatgcagggtaccggtcccgcctgtgcaatgaatggcaccggaaaacc
ctgtctcacaatacggtctgctggaatggcatggatattacctctgtaagtccgggggaa
tgcctgttttttgataaaaataaagtgactgcagcggcaagagatgtctatgacggtatt
cactataccaggacgatacagatctcagggaatacgtttacggatgatttccttgtggaa
agcggaaggaatgggacctttgactacgtgtttcatttggaatccgctcttcatctggaa
tatgatctggatctggaagatgggaacctgggatttgaaaaaaatggctatcagcatatc
cttgaaaccaaacgggtaaaaacaaaagaaaaccatgttgtgttgcgggccggggcagaa
gacgtaatgtggagtatctggatcgatctgactgggggacaccagttatacctcttaaaa
acattggataatccggtgaatcaaaggagaaataccattttacttaggaatacaggaaca
tctccccattatcatttaaaaataatggcggaggataaacaataa
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