Clostridium saccharolyticum WM1: Closa_0193
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Entry
Closa_0193 CDS
T01288
Name
(GenBank) hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
csh
Clostridium saccharolyticum WM1
Brite
KEGG Orthology (KO) [BR:
csh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csh03400
]
Closa_0193
DNA repair and recombination proteins [BR:
csh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Closa_0193
Archaeal homologous recombinant proteins
Closa_0193
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
Lar_restr_allev
DUF4809
Motif
Other DBs
NCBI-ProteinID:
ADL02836
UniProt:
D9R1U5
LinkDB
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Position
214733..217369
Genome browser
AA seq
878 aa
AA seq
DB search
MRIAKVYIKNFRGYGENNTTDEMYLFEHLNDADFVIFSGYNGFGKTGFFEAIEWCITGKI
KGLQETDIYAKNTMKKSSYLKFQSRKEKREREVVVRIIFDNGWGVTRRTKCNALEENGYY
DNLTDLNEQDIKQQFIDEKIKQWTGQLPDQIFKLSFNGQNRNTDFVKSTKAKDRTGSLLE
FMGLKLLDDIVTESDPKKRRKLNSNYEKAKTEYSNVIMEVKRIDEIFKSNKWGSIEEYSK
NIRMLLENINSYQGKMMKIGICQDSLLSYDTLNDLLNSFEKIRILKDTLEKQIAMDDRQI
AEATKHRLQYEWNRIQHFLNSALLFKESNLTELEGEKSRFIRLREIYSESLNELNQMKQK
ILLDVVMPTPVKNDTSIGITKTEKEYYEICLNVYKDLQSVGMNFSISGNYKLDAYNIERE
FRKSEKYVGFLKSLENIVSQQKTHFIEVEGILTEQKELLIQVQGYVNGQNEINSCPVCGG
TEFIKENQNGKQELLEVISTRIAEGNLNLKERNDNLVKIEERLSDCHEKIKKIIRIKYQT
NLNELNVEINRIKDSIVEACDLRIKCNELSFSNLGVRLSIVLTRINQINEFKEKYQLNIF
EIEDIIRKKKEHKSIIEESLRIRFHMYDFENFSKEAEKMNVASILPLFKRRNLITKVTKY
VDEILDFDIGTENRNILRQYEEKCQCSSKLESKVSLLEEAINFRSIINNNSKVMENNLIE
TLVENNELINWIYGKINPHPYFRELSLKIVKDETSILSAEDNDVYLDHIFSEAQMNVLSL
SIFLGLILSINNYEFQQIFLDDPVQSLDDINVVSFIDLLRALIRSKHVNKNYIISTHDHN
FSKLLKIKLRNYSFIEYRFISYGEEGPRINMVQSNILS
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgagaattgctaaagtatatataaaaaattttagaggctatggagaaaataatacgact
gatgaaatgtacttgtttgagcatctaaacgacgccgacttcgtaattttttccggttat
aatggatttggaaaaacgggtttttttgaggctattgaatggtgtattacggggaaaata
aaaggattacaggaaacagatatttatgctaaaaataccatgaaaaaaagttcatatcta
aaatttcagagtagaaaggaaaagagagaaagggaagtagttgtccgtattatttttgac
aatggttggggtgttacaaggagaacaaaatgtaatgctctagaagagaatggttattat
gataatctcacagatttaaatgaacaagatataaaacaacaatttattgatgaaaaaata
aagcaatggactggacagctgccggatcaaatttttaaattaagttttaatggtcaaaat
agaaatacagacttcgtgaaatcaacaaaagctaaggatagaacgggttcgttgcttgaa
tttatgggtctgaagctcctagatgatattgttacagaatctgatcctaaaaaaagaaga
aagttaaatagtaattatgaaaaggcaaaaacagaatatagtaatgtgattatggaagta
aaaaggattgatgaaatttttaaaagtaataaatggggatcaattgaggaatatagtaaa
aatataagaatgctgttagagaatattaattcttatcaaggcaagatgatgaaaattgga
atatgccaggattctttgctatcatatgatactttgaatgacttattaaattcttttgaa
aagattagaatacttaaggatacattagaaaaacagatagctatggatgataggcagatt
gcagaagcaacaaaacatagattacagtatgagtggaatcggatacagcatttcttaaat
agtgctttattgtttaaagaatcaaatctaacagagttagaaggggaaaagtctcgcttt
atcagattgagggaaatttatagtgaaagtttaaatgaattaaaccaaatgaagcaaaaa
attctattagatgttgttatgcctacccctgttaaaaatgatacatccataggtataaca
aaaactgaaaaggaatactatgagatctgtttaaacgtttacaaagatttacaaagtgtt
gggatgaatttttcgatttctggaaattacaagcttgatgcttataacattgaaagggag
tttcgaaagagtgaaaaatatgtgggttttctaaaaagccttgagaatattgtctcacaa
caaaaaacgcattttatagaagtggaaggaatacttacagaacaaaaagaattattgata
caggttcagggctatgtaaatgggcagaatgaaattaacagttgcccggtttgcggagga
acggaatttataaaagaaaatcagaatggaaagcaagaattgcttgaggtaattagtaca
aggatagcagaggggaatcttaatctaaaggaaagaaatgataatttagttaaaatagag
gaacgtcttagcgattgccatgaaaaaataaaaaagattattagaatcaaatatcagaca
aaccttaatgaattaaatgttgaaataaataggataaaagactctattgttgaagcatgt
gatttgagaatcaaatgcaatgagttatcatttagtaatttaggagtaagattgtcaata
gtattgactagaatcaatcaaatcaatgaattcaaagaaaaatatcaattaaatattttt
gagattgaagatattatacgaaagaaaaaagagcataaaagtataatagaggaatcttta
cgtataagatttcacatgtatgatttcgaaaacttctccaaagaagcggaaaaaatgaat
gttgcatcaatattaccactttttaaaagaagaaacttaataacaaaggtaacaaaatat
gttgatgaaattcttgattttgatataggaacagagaatcgaaatatattaagacaatat
gaggaaaagtgccaatgtagtagtaaattagaatctaaggtatcattattggaggaagcg
atcaattttcgttctattattaataataatagcaaagttatggaaaacaatcttatagag
acattggttgaaaataatgaattgataaactggatttatggtaagatcaatcctcacccg
tatttccgagagttaagcttaaaaattgtcaaagatgaaactagcattttatcggcagag
gataatgatgtttatttagaccatattttcagtgaggcacagatgaatgtgctatcctta
agtatttttcttggtttgattctatctataaataattatgagtttcaacagattttttta
gatgacccagtacaaagccttgacgatattaatgtagtatcttttattgacttactacgt
gcattgattcgctcgaaacatgtaaataagaattatattattagtacacatgaccataat
tttagtaaactattaaaaataaagttgcggaattatagttttattgaatataggtttatt
tcttatggagaagagggacctagaataaatatggttcaatccaatattttaagttaa
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