Clostridium saccharolyticum WM1: Closa_0653
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Entry
Closa_0653 CDS
T01288
Name
(GenBank) putative sensor with HAMP domain
KO
K03406
methyl-accepting chemotaxis protein
Organism
csh
Clostridium saccharolyticum WM1
Pathway
csh02020
Two-component system
csh02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
csh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Closa_0653
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Closa_0653
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
csh02035
]
Closa_0653
Bacterial motility proteins [BR:
csh02035
]
Flagellar system
Chemotaxis proteins
MCPs
Closa_0653
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
4HB_MCP_1
HAMP
TarH
Tle3_C
HAMP_PhoQ
Motif
Other DBs
NCBI-ProteinID:
ADL03281
UniProt:
D9R575
LinkDB
All DBs
Position
733834..734904
Genome browser
AA seq
356 aa
AA seq
DB search
MKLKSIRNINIKTKLLFLGGFSIMGLVFMGTESVLTARQINEASTEISQSWVPAIIIAEE
LNTRTSDYRIKEYNHVITDNDRDRDRLEGEMDQIQQDIAQGFKDYELYITNESDRKLMEA
AEEEWSKYLDYSDSLLAVSRENRTQEAFDMIIGESRQLFDDASNGLLKVVDFNRKGAEAA
SIHGDRLYQQLAKVKIITICLISGVISLLVIYLVIAIDKPVKALVEGTRRVANGDLEVYL
PYRSEDEIGILTNSVNQLIKRLKYIIDDEKYLFREIGSENFGVKSTCEHAYRGDFAPILY
SITSLMSRLDAAKKRKERGESADTEENVKEQLSGKAVCREITKHGRRKMDASDKKG
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgaagtctatcagaaatattaatattaaaacaaagctcctgtttttaggggga
ttcagtattatgggattggttttcatggggacggaatctgtgttaaccgccaggcagatc
aatgaagccagtacggaaatctcccagtcctgggtgcctgccatcatcattgctgaagag
ctgaataccagaacatccgattaccgcattaaggaatataaccatgtcatcaccgacaat
gacagggacagggaccgcctggaaggggaaatggaccagatccagcaagacattgcccag
ggatttaaggattatgagctttatatcaccaatgaatcagaccggaagctgatggaggca
gcggaagaggaatggagtaaatacctggattacagtgacagtttacttgccgtaagccgt
gaaaaccgtacccaggaagcttttgatatgatcataggagagtccaggcaattattcgat
gatgccagcaacgggcttttaaaggtggtggattttaaccgcaagggagctgaagcggcc
agcattcatggcgacaggctctaccagcagctcgcaaaagtgaagatcataaccatctgc
ctgatcagcggagtaatttctcttttggtcatttatcttgttattgctattgacaagcca
gtaaaggcccttgtagaaggaaccaggagagttgccaacggagatctggaggtatacctt
ccctaccgctccgaagacgagatcgggatcctgaccaattctgtcaaccagcttattaag
cggttaaagtacatcattgatgatgaaaaatatttattcagggagatcggaagtgaaaat
tttggagtaaaatccacctgtgagcatgcataccggggagattttgctcctatcctctac
tccataaccagcttaatgagccggctggatgcagcaaaaaagcgcaaggaaagaggagag
tcagccgatacggaagaaaatgtaaaagaacagctttccggcaaggctgtatgcagggag
ataacgaaacatggcagaagaaaaatggatgcttcagacaaaaagggctga
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