Clostridium saccharolyticum WM1: Closa_0928
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Entry
Closa_0928 CDS
T01288
Name
(GenBank) glycoside hydrolase family 38
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
csh
Clostridium saccharolyticum WM1
Pathway
csh00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
csh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
Closa_0928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csh04131
]
Closa_0928
Enzymes [BR:
csh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
Closa_0928
Membrane trafficking [BR:
csh04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
Closa_0928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Glyco_hydro38C2
CAP59_mtransfer
Motif
Other DBs
NCBI-ProteinID:
ADL03547
UniProt:
D9R6P1
LinkDB
All DBs
Position
1007176..1010316
Genome browser
AA seq
1046 aa
AA seq
DB search
MIQIKERIGKLVEDLKGLTYSKEVPVTRYRMLKSGERFLNVQDLNTDDWEELTSAELWGG
HREYFWFETVITIPEGFKDQWVVYELKTGREGQWDATNPQFTIYINGIRRQGLDVNHRDV
LLTEKAEPGETFRIVLSAFTGDQNFKLVMDSRIKVLDRETEQYYYDISVPYQVARLLPDS
DSAYLSIIHAVNESLNLLDLRKEYSEEYYESLKKARQYMKEEFYDKYSGSSKETVYCVGH
THIDVAWLWTLAVTEDKAVRSFSTVLELMKQYPEYIFMSSQPQLYKYVKKHAPEVYQEIK
KRVAEGRWETEGGMFVEADCNLSSGESLVRQFLHGKEFFKEEFGKDNEILWLPDVFGYSA
ALPQIMKKCGIKYFMTTKISWNEFNKMPYDTFEWEGIDGTRILTHFSPSRDYHKAAEEGG
TETEHFTTYNAYINPSQVKGAWARYSQKYLNDEVLMSFGYGDGGGGPTKDMLENQRRLEK
GLPGCPRTVMTTSKAFFETLDQNVRGEKYLPSWVGELYLEYHRGTYTSMARNKKYNRKSE
FLFENAEFYGMLDGILNQNPYPREEIRDAWEVILRNQFHDILPGSSIKEVYEDSRKEYEA
IGKTGRELVKRALIHIAEGVDARKNDLVVFNPNSYEGEGTADFQAPEQMDNLTVMDGEVM
LPAQKTGSGAWLFCPSKVPSKGYKTFTLKPGRCDTGLRADERHLENDYVCVTFHENGQIS
SIYDKGNDREVLQENRCANVLMTYEDRPHNYDAWDVNNYYVEKSWEITQVSGMELVENGP
VRATICVKRKYLDSTIEQYISLLYNSSEILIRNEIDWKENHIFLKSLFPVDIHTDEATYE
IQYGNVKRKTHFNTMWDYAKFEVCMHKWIDVSEDDYGVSMINDCKYGCHVHNGEIGISML
KSASYPNPDADKEHHSFVFSIYPHKGDWKKANTIQKAYSMNNPMTALVKENDGGRLPGEY
SLVKADAHNVVIEVVKQSQKGTQMILRFYETNNKRTRGNMTFGMNVQRIVECNMLEEEEA
EVSCQDRTVPFLLHPYEIKTWKVTFQ
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgatacagatcaaagaacggattggaaaactggtggaggatttaaagggtctgacctat
tccaaggaagttcctgtcaccagataccggatgttaaaatccggagaacgctttttaaat
gttcaggaccttaataccgatgactgggaggaactaactagtgcagaactgtgggggggc
cacagggaatatttctggtttgaaacagtcattaccattcccgaggggtttaaggatcaa
tgggtggtgtatgagttaaaaaccggaagagaaggtcagtgggatgccacgaatccccag
tttaccatttacatcaatggcatcagacggcaggggcttgacgtcaatcacagggatgtc
ctgctgacggaaaaggcagagccaggtgagacgtttcgaatcgttttatccgcatttacc
ggggatcagaattttaagcttgttatggattccaggataaaggtgttagacagggaaaca
gaacagtattattatgatatttccgttccctatcaggtcgccaggcttcttcctgacagt
gacagtgcctatctctccatcattcatgcagtgaatgaatccttaaatcttctggactta
agaaaggaatattcggaagaatattatgaaagcctgaaaaaagccaggcaatatatgaag
gaagaattctatgataaatatagcggaagcagcaaagaaacggtttactgcgtgggtcat
acccacattgacgtagcctggttatggacccttgcggttacggaggataaggcggtaaga
agcttttccacggtgctggagctgatgaagcagtacccggaatacatctttatgtcaagc
cagccccagctttataaatatgttaagaagcatgctcctgaggtttaccaggagattaaa
aaacgagttgcagaaggaagatgggagacagaaggcggcatgtttgtggaagcagactgc
aatctttcctccggggagtctcttgttcgccagttcctgcatggcaaggaattctttaag
gaagaattcgggaaggataatgaaatcttatggcttcccgatgtattcggatattccgcc
gcacttccccagatcatgaaaaaatgcggcatcaaatattttatgactacaaaaatcagc
tggaatgaatttaataaaatgccttatgacacctttgaatgggaaggaattgacggaaca
agaattttaacccacttcagcccaagtcgtgattatcataaggcggctgaggaaggcgga
acagaaaccgagcattttaccacctataacgcatacataaacccatcccaggtaaagggg
gcctgggccagatacagccagaaatatttaaatgatgaggttttaatgtcctttggctac
ggggacggaggcggaggtcctaccaaggacatgctggaaaaccagcggaggcttgaaaaa
gggcttccgggatgtccaaggaccgtaatgaccacgtccaaggcattttttgaaacactg
gaccagaacgtgagaggggaaaaatatctgccttcctgggtgggagagttatacctggag
taccacaggggcacctatacctccatggccagaaacaagaagtacaacaggaaatcagag
tttctgtttgaaaatgccgaattctacggaatgcttgatgggatattaaatcagaatcct
taccccagggaggagatccgggatgcctgggaagtgattttaagaaaccagtttcacgat
atccttccgggatcctccataaaagaagtctatgaggattccagaaaggaatatgaagca
atcgggaagaccggaagagaactggtaaaacgcgccctgatccatattgcagaaggagtg
gatgcccgtaagaatgatcttgtggtattcaatcccaacagttatgagggggaaggaacc
gcagattttcaggctccggaacaaatggataaccttacggtaatggatggggaggtgatg
ctgccagctcagaaaaccggaagcggcgcctggctgttttgtccttccaaggttccttcc
aagggttacaagacctttacattaaagcctggaagatgtgacaccggtttaagagcggat
gaaaggcatctggaaaacgattacgtctgtgtgacctttcatgaaaatggacagatttct
tcaatttatgataagggaaatgaccgggaagtccttcaggaaaacaggtgtgccaatgtg
cttatgacttatgaggaccggccccataattatgacgcctgggatgtgaacaattattac
gtagaaaaatcctgggagattacccaagtaagcggcatggagcttgtggaaaacggaccg
gtccgggctaccatatgtgtaaagagaaagtatctggattccaccatagagcagtatatt
tcacttctatataacagttctgaaatccttataagaaatgaaattgactggaaggaaaac
catattttcttaaagtccctgttcccggttgatattcatacggatgaagccacttatgaa
atccagtatggaaatgtaaaacggaaaacccattttaataccatgtgggattatgcaaaa
tttgaggtatgcatgcataagtggattgatgtttccgaggatgattacggggtcagtatg
atcaatgactgtaaatacggctgccacgtccataatggtgaaattggaatttccatgctg
aaatcagcatcctacccgaatccggatgctgataaggaacaccacagcttcgtattttcc
atctatccccataagggtgactggaaaaaggcaaatacaatacaaaaggcgtattccatg
aataacccaatgacagcccttgtgaaagagaatgacggaggacggcttcccggagaatat
tctctggtaaaggcggatgcccataacgttgtcattgaggtggtaaagcagtcacaaaaa
gggactcaaatgatcctgcgtttttatgagacaaacaacaaacggaccagggggaatatg
acctttggcatgaacgttcaaagaattgtggaatgcaatatgctggaggaggaggaagca
gaagtaagctgtcaggacagaacagttccatttctacttcacccttacgaaatcaaaacc
tggaaggtcacgttccagtaa
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