Clostridium saccharolyticum WM1: Closa_1007
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Entry
Closa_1007 CDS
T01288
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
csh
Clostridium saccharolyticum WM1
Pathway
csh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Closa_1007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csh03019
]
Closa_1007
03110 Chaperones and folding catalysts [BR:
csh03110
]
Closa_1007
03029 Mitochondrial biogenesis [BR:
csh03029
]
Closa_1007
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csh04147
]
Closa_1007
Enzymes [BR:
csh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Closa_1007
Messenger RNA biogenesis [BR:
csh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Closa_1007
Chaperones and folding catalysts [BR:
csh03110
]
Heat shock proteins
HSP60 / Chaperonin
Closa_1007
Mitochondrial biogenesis [BR:
csh03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Closa_1007
Exosome [BR:
csh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Closa_1007
Exosomal proteins of other body fluids (saliva and urine)
Closa_1007
Exosomal proteins of breast cancer cells
Closa_1007
Exosomal proteins of colorectal cancer cells
Closa_1007
Exosomal proteins of bladder cancer cells
Closa_1007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ADL03624
UniProt:
D9R6W8
LinkDB
All DBs
Position
1093561..1095180
Genome browser
AA seq
539 aa
AA seq
DB search
MAKQIKYGVDARKALESGVNQLADTVRVTLGPKGRNVVLDKSFGAPLITNDGVTIAKEIE
LEDAFENMGAQLVKEVATKTNDVAGDGTTTATVLAQAMINEGMKNLAAGANPIVLRKGMK
KATEAAVEAIAKMSEPIKGKASIARVAAISASDDAVGEMVADAMEKVSNNGVITIEESKT
MKTELDLVEGMQFDRGYISAYMCTDMEKMEANLDDPYILITDKKISNIQEILPLLEQVVQ
SGARLLIIAEDVEGEALTTLIVNKLRGTFNVIAVKAPGYGDRRKEMLQDIAVLTGGTVIS
DELGYELKNATLDLLGRAKSVKVQKENTVIVDGCGDKEAITARIGQIKGQIEETTSDFDR
EKLQERLAKLSGGVAVIRVGAATETEMKEAKLRMEDALSAARAAVEEGVIAGGGSAYVHA
ITQIEDVVKGLEGDEKTGGKIILKALEAPLYHIVANAGLEGSVIINKVKESKVGTGFDAY
KEEYVDMVEAGILDPTKVTRSALQNATSVASTLLTTESVVANIKEKAPAMPAPGGMDMM
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacagattaaatatggcgttgatgccagaaaagcactggagtccggagttaat
cagttagcagataccgttcgtgtaacattaggccccaagggcagaaacgttgttctggat
aaatcctttggcgcacctttgatcacgaacgacggtgttaccattgcaaaagagatcgag
ctggaggatgcctttgaaaacatgggcgctcagcttgtaaaagaggttgctacaaagacc
aatgatgtggccggcgacggtaccaccactgcaactgtattggctcaggctatgatcaat
gaaggaatgaagaacctggcagctggagcaaaccccattgttttaagaaagggtatgaaa
aaagccaccgaagcagcggtagaagcaattgcaaagatgagcgaaccgattaagggcaag
gcttccatcgccagagttgcagctatttccgcttccgatgatgcggtaggcgagatggta
gctgacgctatggagaaggtttccaacaacggcgttattaccattgaggaatccaagacc
atgaagacagaactggatctggtggaaggtatgcagtttgacagaggttatatttccgca
tacatgtgtaccgacatggaaaagatggaagctaatttagacgatccatacattctgatt
acagataagaagatttcaaacatccaggagatccttcctttattagagcaggtggttcag
tccggcgcaagacttctcatcatcgcagaagatgtggaaggcgaggctttaacaacctta
atcgttaataaattaagaggtaccttcaatgtcatcgcagtaaaggctcctggctatggc
gacagaagaaaagaaatgttacaggatatcgctgttttaacaggcggtaccgtgatttcc
gatgaattgggatacgagcttaagaatgccacccttgacctgttaggacgtgcaaaatcc
gtaaaggttcagaaggaaaacaccgtaattgtagacggatgcggcgataaggaagcaatc
acagcaagaatcggccagatcaagggacagatcgaagagaccacttctgactttgacaga
gagaaattacaggaaagacttgcaaagttatccggcggcgtagcagtaatccgggtaggt
gctgcaacagaaaccgaaatgaaggaagcaaagcttcgtatggaagatgctttatcggca
gcaagagcagccgtagaggaaggtgtcatcgcaggcggcggttctgcttacgttcatgca
attacacagattgaagacgttgtaaagggtctggaaggcgatgaaaagaccggaggaaag
atcatcttaaaggctcttgaagctccgttataccacattgtagccaacgcaggtctggaa
ggaagcgtcattatcaataaggtaaaggaatctaaagtaggaaccggttttgacgcatac
aaagaagaatacgtagatatggtagaagcaggcatcctggatccgactaaggttaccaga
agcgcccttcaaaatgctaccagtgttgcatcaaccttattgacaacagagtccgttgtt
gctaatattaaagaaaaagcacctgcaatgccagctccaggcggaatggatatgatgtaa
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