Clostridium saccharolyticum WM1: Closa_1086
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Entry
Closa_1086 CDS
T01288
Name
(GenBank) conserved hypothetical protein
KO
K06958
RNase adapter protein RapZ
Organism
csh
Clostridium saccharolyticum WM1
Brite
KEGG Orthology (KO) [BR:
csh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csh03019
]
Closa_1086
Messenger RNA biogenesis [BR:
csh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Closa_1086
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_18
Init_tRNA_PT
AAA_28
UBA_N4BP1_C
AAA_22
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ADL03702
UniProt:
D9R7H3
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Position
1179943..1180824
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AA seq
293 aa
AA seq
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MRLVIVTGMSGAGKTQALKMLEDMGFYCVDNLPIPLIETFAELTLSNQAGIRNAALGIDI
RSGEDLSVLNRIFDEWSRNRVPFEILFLDAGDETLIKRYKETRRAHPLAAGGRIDSGIEK
ERAKLAFLKEVADYIIDTSRLLTKELRQELEKIFVNQESYRNLFITILSFGFKYGIPSDA
DLVFDVRFLPNPYYSEELRPKTGEEKEVRDYVMQHGTAALFLDKLYDLLEFLIPNYVLEG
KNQLVIAIGCTGGKHRSVTIARSVYDRFKSREEFGIKMEHRDIDKDNIRKRMV
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
gtgaggctagtcattgtaacaggcatgtcaggtgcaggaaagacccaggcacttaagatg
ctggaggacatgggattttattgcgtggataatttacccattcccctgattgaaacattt
gcggagctgactttaagcaatcaggcaggaatccggaacgcggctttggggatcgatatc
cgaagcggagaggatttatcggtattaaaccggatttttgatgagtggtcaagaaaccgg
gtaccctttgaaatactcttcctggatgcgggggatgaaactttgatcaagcgctataag
gaaaccagaagagcccatcccctggcggcaggaggcaggattgacagcgggatcgaaaaa
gaacgggcaaaacttgcgtttttaaaggaagtagcggattatatcattgataccagccga
cttcttacaaaggaactcaggcaggaattggaaaaaatatttgtgaaccaggaatcttac
cggaatttgtttatcaccattctttcttttgggttcaagtatggaatcccatcggatgca
gatctggtatttgatgtaaggttcctgccaaatccctactattcagaggagctgcggccc
aaaaccggagaagaaaaagaagtgcgggactatgtgatgcagcatgggaccgctgccctg
tttttagacaagctatacgacctgctggagtttttgattcccaattatgttttggaagga
aaaaatcagctggtgattgcaattggctgtacaggagggaaacaccggtcggtcaccatt
gccaggtctgtttacgacagatttaagtccagggaagaatttgggattaagatggagcac
cgggacatcgacaaggataatatacggaaaaggatggtctag
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