Clostridium saccharolyticum WM1: Closa_1179
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Entry
Closa_1179 CDS
T01288
Name
(GenBank) putative ABC transporter, solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
csh
Clostridium saccharolyticum WM1
Pathway
csh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
csh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Closa_1179
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csh02000
]
Closa_1179
Transporters [BR:
csh02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Closa_1179
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
LPAM_2
Motif
Other DBs
NCBI-ProteinID:
ADL03787
UniProt:
D9R835
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Position
1274178..1275422
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AA seq
414 aa
AA seq
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MKRRISAALLAVITALSMAACGNKERPKEEKKQASEIEEMSFGRMQEEAKGTAVTFYGWG
GDERLNEWLDNAFAPAMKEKYDITMERVPMDIDQILSQLSGEIQAGEKDGSIDMIWINGE
NFRSARENNMLYGPFVDKLPNFQDYVDQESEDVTLDFAYPIEGFEAPYGKAQIVMIADTA
VIPDMPKSAGALKDFVRKYPGKVTYPALPDFTGSAFVRNIIYEICGYEQFLDMKGDKETV
KAAVEPAMAYLRELNPYLWNEGKTFPGSSTTLDNMFADGEVVLNMTYEAYGTAVKISDGA
YTQTTRSFQFDKGTIGNTNFMAIAANSGNKAGAMVAINEMLSPEIQADRYDTLKVIPVLD
NTRLTKEQKAAFDNVDLGKGTIPQDELLSKRLPEMPAELVPIIEEIWTEEVAGK
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaagaatttcggcagcgcttctggcagttataacagctctttccatggcagcc
tgcggaaacaaggaaagaccaaaagaagagaaaaagcaggcttcagaaatagaagaaatg
tccttcggcagaatgcaggaggaagcaaagggcactgccgttacattttatggctggggc
ggggatgagaggctgaatgaatggcttgacaatgccttcgcaccggcaatgaaggaaaag
tatgatattaccatggaacgtgttccaatggatattgatcagatattaagccagttgtca
ggagagatccaggcgggcgaaaaggatggaagcattgacatgatctggatcaatggagaa
aacttccgttctgccagagaaaacaatatgctctatgggccttttgtggataaacttcct
aacttccaggactatgtggaccaggagtccgaagacgtaacccttgattttgcctatccc
attgaaggctttgaagctccttatggaaaagcacagatcgtgatgatagcggatacggcg
gtaattccagacatgccaaaaagcgccggggctttaaaggattttgtcaggaagtatccg
gggaaggtgacgtatccggcccttcccgattttacaggaagcgcgtttgtcagaaatatt
atctatgagatctgcggatatgaacagtttttggatatgaagggggataaggaaacggtg
aaagctgccgtagaacctgcaatggcatatttaagggaactgaatccatacctgtggaat
gaaggaaaaaccttccccggttcatcaaccaccctggacaatatgtttgcagacggagag
gtggttctgaatatgacatatgaagcttatggaaccgccgttaaaatatcagatggagcc
tatacccagacaacccggtctttccagtttgacaaaggcaccatcggaaataccaatttt
atggccattgcagcaaattccggaaataaggcaggagccatggtggcgatcaatgaaatg
ctgtcaccggagatccaggctgaccgttatgatacattaaaagtcattccggttcttgac
aatacaaggcttacaaaggaacagaaggcggcatttgataacgtggatcttggaaaggga
acgattccccaggatgagctgttgtcaaaacgtcttccggaaatgcctgctgagctggtt
cctattattgaagagatatggacagaagaagtggcaggaaaataa
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