Clostridium saccharolyticum WM1: Closa_1345
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Entry
Closa_1345 CDS
T01288
Name
(GenBank) sigma-70 region 3 domain protein
KO
K03086
RNA polymerase primary sigma factor
Organism
csh
Clostridium saccharolyticum WM1
Pathway
csh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
csh00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Closa_1345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csh03021
]
Closa_1345
Transcription machinery [BR:
csh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Closa_1345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
DUF2959
KR
Csm2_III-A
IF2_N
DUF2218
Rx_N
Motif
Other DBs
NCBI-ProteinID:
ADL03948
UniProt:
D9R8X3
LinkDB
All DBs
Position
1453832..1454443
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AA seq
203 aa
AA seq
DB search
MHDDFYQMYLEEMGNIPPCTRDEQERLLKEAAEGRKEAKKRLVEGNLRTALEYAREYDGR
GVLITDLVQEANMALMMAVEEFSAMENGRLAFDSFTGRKIREALTAAVEEQQSACQTGEE
LAARVNVLQKVSQALAGELGREATVEELADKMKMSVEEIKGIMKMAMDAMSMNAETMDLE
ALAEVEGIEITEDEAAEDYDYEE
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgcatgatgatttttaccagatgtatctggaagagatgggaaatatccctccctgtacc
agggacgagcaggaaaggcttttaaaggaagctgcggagggcaggaaggaagccaagaaa
agacttgtggaaggaaacttacggacagccctggaatatgccagggaatatgacggcaga
ggtgtgcttatcacagacctggtccaggaagccaatatggcccttatgatggctgttgag
gagttctcagccatggaaaatggaaggctggcgtttgacagcttcaccggccggaagatc
agggaagctcttactgcggctgtggaggagcagcagtccgcctgccagacaggagaagag
ctggcagcccgggtgaatgtactccaaaaagtatcccaggctcttgcaggcgaactgggc
cgggaggcaacggtggaagaactggcggataagatgaagatgtctgtggaagaaataaaa
ggaatcatgaaaatggcaatggacgccatgagcatgaatgccgaaaccatggacttagaa
gccctggcagaagtggaaggcattgaaatcactgaggatgaagcggctgaagattacgat
tacgaagaataa
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integrated database retrieval system
