Clostridium saccharolyticum WM1: Closa_1643
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Entry
Closa_1643 CDS
T01288
Name
(GenBank) ABC transporter related protein
KO
K18887
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
csh
Clostridium saccharolyticum WM1
Pathway
csh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
csh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Closa_1643
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csh02000
]
Closa_1643
Transporters [BR:
csh02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Closa_1643
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
NBCH_WD40
DUF87
AAA_16
KAP_NTPase
AAA_23
nSTAND1
Motif
Other DBs
NCBI-ProteinID:
ADL04239
UniProt:
D9RAG1
LinkDB
All DBs
Position
1741626..1743365
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AA seq
579 aa
AA seq
DB search
MNRYWKYIRPYLGAFILAPLLMLTEVLGEIMLPKLTSMIINNGVAGRDMGYILSMGGRML
AIAVFMAAGGIGGSYFSSKASICFSTDLRKDVFHKVQQFSFNNIDDFSTGSLVTRLTNDI
QQIQNVVMLSLRMMFRAPGMLIGGLIMAYLMNRQLMVVLLAVIPVLILSIFIILKMAFPR
FEAMQKKIDRLNSGVQEALTNVRVIKSFVREDYEEQKFQVTNKDLKEGSLDAMKIVVASM
PVMMLAMNVTTLAVVWYGGNLIIAGKMPVGDLTAFTTYIVQILMSLMLLSMVFLQASRAM
ASLRRVREVLDTEIDLTDEHGTAKSAQVIRGKVEFKNVSFQYTKGTDDMILKHIDFVAEP
GETIGIIGSTGSGKTSLVQLIPRLYDADEGQVLVDGIDVKDYSIRNLRKGVGMVLQKNVL
FSGTIEENLRWGSQDATMEEVILMAESAQADGFVSSFTDGYDTDLGQGGANVSGGQKQRL
CIARALLKKPKILILDDSTSAVDTATEARIRQCFQTTLKDTTKFIIAQRIGSVENADKII
VLDDGQIAGIGTHEELLVSCEAYQEIYYSQREREEEAGA
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
ttgaaccgatattggaaatatatcagaccatacctgggagcctttatcctagccccgctt
ctgatgctgacagaagtattgggggaaattatgctcccaaagctgacctctatgatcatt
aacaacggagtcgccggaagagacatgggatacattttaagcatgggcgggagaatgctt
gccatcgccgtattcatggctgcaggcggaatcggaggttcctatttttcttccaaggct
tccatttgtttcagcacggatctgcgaaaggatgtttttcataaagtccagcaattttca
tttaacaacattgacgacttcagcacaggatcccttgtcaccagactgacaaacgatatc
cagcagattcagaatgtggttatgttgagcctgcgcatgatgttccgtgcgccggggatg
ctcatcggaggccttattatggcttatcttatgaaccgccagctgatggtagtactgctg
gcagtgatccccgtactcatactgtctatcttcattattttaaagatggcgtttccccga
tttgaggctatgcagaagaaaatcgaccgcctaaactccggagtgcaggaggctttgacc
aatgtgcgggtgattaaatcctttgtcagggaggattacgaggaacagaaatttcaagtc
acaaacaaggatctgaaagaaggcagtttggatgccatgaaaatcgtcgtagccagcatg
ccggtgatgatgcttgccatgaatgtcacaacccttgctgtagtatggtatggaggaaat
ttaatcattgcaggaaagatgccggtaggtgatttaaccgcatttaccacctatatcgtc
cagattctcatgtccctgatgctgctgtccatggtgtttttacaggcatcccgggccatg
gcttctttaagacgtgtcagagaggtactggataccgaaattgatttaacggatgaacat
gggacggcaaaatccgcccaggttataaggggaaaggtggaatttaaaaacgtttccttc
cagtatacaaagggaacggatgatatgattttaaaacacattgattttgttgcggagcct
ggagagaccattggaattatcggttccacgggaagcggaaagacatcacttgttcagctg
attccccgtttatacgatgcggatgaaggacaagttctggtagacggcattgacgtaaag
gattactccatcaggaatcttagaaagggagtggggatggttttgcagaagaatgtccta
ttttcgggaaccattgaagagaatctccggtggggcagccaggatgcaaccatggaagag
gtgattctcatggcggaaagcgcccaggcggacggctttgtttccagctttacggatggg
tatgatacggatctgggacaggggggggccaatgtatccggcggacagaagcagagactt
tgcattgccagggcccttctaaagaaaccgaaaatactgatcttggatgacagcacctct
gctgtggacacggcaacggaagcccgtatccgccaatgcttccagaccactttaaaggat
accaccaagttcatcatagcccagcggatcggctccgtggaaaatgcggataagatcatt
gtgcttgatgacgggcagatcgcaggcataggaactcatgaagagctgctggtgtcttgc
gaggcttatcaggaaatctattattcacagagagaacgggaagaggaggcaggtgcatga
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