Clostridium saccharolyticum WM1: Closa_1727
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Entry
Closa_1727 CDS
T01288
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
csh
Clostridium saccharolyticum WM1
Pathway
csh03420
Nucleotide excision repair
csh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Closa_1727
03430 Mismatch repair
Closa_1727
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csh03400
]
Closa_1727
Enzymes [BR:
csh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Closa_1727
DNA repair and recombination proteins [BR:
csh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Closa_1727
MMR (mismatch excision repair)
Other MMR factors
Closa_1727
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
UvrD_C_2
AAA_11
ResIII
PhoH
MSSS
Motif
Other DBs
NCBI-ProteinID:
ADL04323
UniProt:
D9QZ72
LinkDB
All DBs
Position
1845537..1847825
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AA seq
762 aa
AA seq
DB search
MSIYDTLNPMQKEAVLHTEGPLLVLAGAGSGKTRVLTHRIAYLIEEKSINPWNILAITFT
NKAAGEMRERVDRLVGFGADSIWVSTFHSSCVRILRRHIESLGYTTNFTIYDSDDQKTLM
RHVLKGLDMDPKIYKDRAMLGFISTAKNELVTAEEFEQNAGGDFRQKKVAQIYKEYQNQL
RKNNALDFDDLIMKAVQLFQNNPEILDYYQERFKYIMVDEYQDTNTAQFKLISLLAGKYR
NLCVVGDDDQSIYKFRGANIENILNFEKAYPGAKVIKLEQNYRSSQSILNAANEVIRHNR
GRKDKTLWTANEEGPLVQFKQFENASEEADAIVRDIRNSSSEYQDCAVLYRTNAQSRLIE
EKCLQHNVPYRMVGGVNFYQRKEIKDILSYLKTIANGRDDLSSLRIINVPKRGIGATSLG
RVQAFASEHGFAVYDAFCRAKAVPGLGKTAEKILKFTELIEDFRNRLDEETYSIHDLIED
ILDETGYQKELETEGEIEYQTRLENIEELINKAVSFEGEHEHPNLNEFLEEVALVADIDR
MDDSENRVTLMTLHSAKGLEFPRVYLSGMEDGLFPSMMSISSDDKEAVEEERRLCYVGIT
RARNFLMMTAARQRMVNGETRYSKISRFIEEIPGELLDSNKLEPRLSASRTLNYDDSGLP
WGKARATGRASAVSSFGPGNNAYASKTSLPASSPGFGKAFTVEKAASLNYKEGDRVSHIK
FGEGEVLEIKDGGRDFEVTVRFDQAGVKKMFASFAKLKQVRI
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgagtatttatgatacattaaatccaatgcaaaaggaagcggtactccatacggaggga
ccgcttctcgtgctggcaggagcagggtcaggaaagaccagagttcttacacaccgcatt
gcctatttaatcgaagaaaaaagcatcaatccatggaatatcctggctattacttttact
aataaagcggcaggtgagatgcgggaacgtgtagaccgcctggtgggctttggtgcagac
agtatctgggtttccacctttcattcatcctgtgtccgcattctcaggcggcatattgag
agccttggttatacgacgaattttactatatatgattccgatgaccagaaaacactgatg
cgtcatgtgctaaagggtcttgatatggatcccaagatctataaggaccgggcgatgctg
ggatttatttccacagcaaagaacgagctggtgacggctgaggaatttgaacagaatgcc
ggcggtgatttcaggcagaaaaaggtggctcagatttataaggaatatcagaaccaacta
agaaagaacaatgccctggattttgatgatctgatcatgaaggcggtgcagctgttccag
aacaatcctgaaattctagattattaccaggaacgctttaaatacatcatggtggatgag
tatcaggataccaatacagctcagtttaaactcataagcctgctggcaggaaaatacagg
aacctttgtgtggtaggggatgatgaccagtccatttataaattccggggggccaacatt
gaaaatattttgaattttgaaaaggcttatccgggggcaaaggtgattaaactggagcag
aactatcggtccagccagagcattttaaatgcagccaatgaagtgatccgccataaccgg
ggacgtaaagacaaaaccctgtggacagccaatgaagagggccccctggtacagtttaag
cagtttgagaacgcttccgaggaagcggatgccattgtccgggatatacgaaactcctct
tctgaatatcaggactgtgcggttctttataggaccaatgcccagtcccgtctgattgaa
gaaaagtgccttcaacacaacgtcccataccgcatggttggaggggtgaatttctatcag
aggaaggaaatcaaggatattctgtcgtatttaaagaccattgccaatggaagggatgac
ctatcctctttaagaatcatcaatgtgcccaagcgtggaatcggagcgaccagcctgggc
agagtgcaggcctttgcttctgaacatgggtttgctgtttatgatgcattttgccgggca
aaggccgtaccaggacttggaaaaacggctgagaaaatccttaaatttacggaactgatt
gaagatttcaggaataggcttgatgaagagacatattccattcatgatctgattgaggac
atcctggatgaaaccggctaccagaaggagcttgagacggaaggcgaaatcgaatatcag
acccgcctggaaaatattgaagaactgatcaataaggcggtcagttttgagggggagcat
gagcaccccaatttaaacgaatttctggaagaggttgctttggtggccgatattgaccgt
atggatgattcagaaaacagggtaactcttatgaccctgcacagtgccaagggtctggag
tttccaagagtatacttaagcggtatggaagacgggctgtttccaagtatgatgtccatt
tcttcggatgacaaggaggctgtggaggaggagcggcgtctttgttatgtgggaatcacc
agagcccggaatttcctgatgatgacggcagcaagacagcgtatggtaaatggagagacc
agatattccaagatcagtcgtttcatagaagagatccctggtgaacttttggattccaat
aagctggaaccaaggttgtctgcttccaggacccttaattatgatgacagcggcctgccc
tggggaaaagcaagggcaacgggaagagcatcagcggtcagcagctttgggcccggaaat
aatgcatatgcttccaaaacttcactacctgcatcttcacctggatttggcaaagcattt
accgtagaaaaggcggcttctttaaattacaaagagggcgaccgggtcagccatatcaag
ttcggggaaggggaagtgctggagatcaaggatggaggaagggattttgaagtcacggtc
cggtttgaccaggcaggcgtcaaaaaaatgttcgcttcctttgcaaagctgaaacaggta
cgaatttaa
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