Clostridium saccharolyticum WM1: Closa_1729
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Entry
Closa_1729 CDS
T01288
Name
(GenBank) RNA methyltransferase, TrmA family
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
csh
Clostridium saccharolyticum WM1
Brite
KEGG Orthology (KO) [BR:
csh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csh03009
]
Closa_1729
Enzymes [BR:
csh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Closa_1729
Ribosome biogenesis [BR:
csh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Closa_1729
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Cons_hypoth95
Methyltrans_SAM
Methyltransf_15
N6_N4_Mtase
Methyltransf_11
Methyltransf_12
TRM5-TYW2_MTfase
PrmA
PCMT
FtsJ
UPF0020
RrnaAD
DOT1
Methyltransf_4
Ubie_methyltran
Methyltr_RsmB-F
Motif
Other DBs
NCBI-ProteinID:
ADL04325
UniProt:
D9QZ74
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Position
1848420..1849781
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AA seq
453 aa
AA seq
DB search
MKKGEIYEGTIERFDFPDKGFIELPEGKIGVKHGLPGQKVRVMINKKRGGRCEGRILEVL
ERSSLESAETPCPHFGSCGGCVYQTIPYKEQLKIKEQQVKALLDGVCEDYEFEGILPSPA
EAEYRNKMEFSFGDEYKEGPLALGMHKRGSFYDVVTTTECRIVNPDFCNILKAVKDYFEN
LGTGFYKKMQHTGYLRHLLVRRAVKTGEIMVALVTTTQEDVDLKPFTEMLLELPLNGRIV
GILHIFNDSLADVVKSDRTDILYGQDYFYEELLGMKFKISPFSFFQTNSLGAEVLYETVR
RYVGETKDKVVFDLYSGTGTIAQMIAPVAKKVVGVEIVKEAVDAAKENTRLNGLENCEFI
DGDVLKVIDELPDKPDLIILDPPRDGIHPKALGKIIDFGVDRLVYVSCKPTSLARDLVVL
QERGYKVEKACCVDMFPSTANVETIMMLERKAR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaagggtgagatatacgaaggaaccatagaaagatttgattttccggacaaaggg
ttcattgagctcccggaaggaaaaattggagtaaaacatgggcttcccggccagaaggtg
cgggtcatgataaataaaaagagaggagggcgctgtgagggaagaattcttgaagttttg
gagcgttcaagtctggaatcagcagaaactccctgccctcattttggaagctgcggaggt
tgtgtttatcagaccattccatataaggagcagcttaagatcaaggagcagcaggtaaag
gctctccttgatggagtctgtgaggactatgagtttgaaggcatactgccaagtcctgca
gaggcagaataccggaataaaatggagttttcctttggtgatgaatataaggagggcccc
cttgctttaggtatgcataagagggggagtttttatgatgtggtaaccactacagaatgc
agaatcgttaatccggatttctgtaatattttaaaggctgtaaaggattactttgaaaac
ctgggaaccggtttttataagaagatgcagcatacgggctatctgcgccatctgcttgta
cgccgggcagtaaagaccggagagattatggtggctttggttactacgactcaggaagat
gtggacttaaagccttttacggaaatgcttctggaactgcccttaaatggcaggattgta
gggatccttcatatttttaatgacagtctggctgatgtggtgaaaagcgaccggacggat
attctatatggacaggattacttttatgaggagctgttaggaatgaaatttaaaatttcc
ccgttttcctttttccagaccaattcccttggggcggaagttttgtatgagactgtaaga
agatatgtgggggagacaaaagataaggtggtattcgatttgtacagcggaaccggtacc
atcgctcagatgatcgctccggtagccaaaaaggtggtgggcgtggaaatcgtgaaagag
gcagtggatgccgcaaaagagaatacaaggctgaatgggcttgagaactgtgaatttatt
gacggggatgttcttaaggtcattgatgagttaccggataagccggatctgattatactg
gatccgccaagagatgggattcatccgaaggcgttaggaaagatcattgattttggggtg
gacaggctggtgtatgtttcctgtaagcctaccagcttggcaagggatctggtggttctt
caggagagagggtataaggtggagaaggcttgttgtgtggatatgtttccttcgacggca
aacgttgagaccattatgatgcttgagcggaaagcccggtaa
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