Clostridium saccharolyticum WM1: Closa_1798
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Entry
Closa_1798 CDS
T01288
Name
(GenBank) putative sigma54 specific transcriptional regulator
Organism
csh
Clostridium saccharolyticum WM1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
AAA_2
AAA_7
AAA
Mg_chelatase
HTH_12
Rrf2
AAA_19
AAA_3
Fe_dep_repress
PAS
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ADL04381
UniProt:
D9QZD0
LinkDB
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Position
1931840..1933924
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AA seq
694 aa
AA seq
DB search
MKKSIAVIALDPFAGKAYAQQVRSVFGERAVVRNYSMMDGTAANMEPCDLYMGSTDAFDA
MGDPSRYIPPKAQRMEIQVTYLKEAVRRLEEIPKGTKVLYVNITEVMAREAVTQLEQLGI
THLKFILYAPGSKLTDTAEIAVTPDEERYVPRGIPTIINLGQRTCSSDTMIEAAFRLGFD
DLLEEVEFKQYQESVCTNTYYFDQMFNRSRRLESQFDILMEVLDQGVIAVNEHGEIYAVN
KNAADITRVPENLSISNVGEEVFPYIPFRKCLEEKKETSPQVVRVAGNLVSLYVRPVLRR
EACVGAFAILQKFNEMERRQNELRVQLMKKGQGHRAKYCFDDVIGTSESIVKTKFILNKM
ASTESPVLLIGETGTGKELFAHSVHNASKRRDQPFVAINCAAMPENLLESELFGYEEGAF
TGAKKGGRPGLFEFAHQGTLFLDEVEGMSPALQVKLLRVLQEREIMRVGGNQIIHVDVRI
VAATNEELEQKVAEGTFRQDLYYRLNALPVLIPPLRKRGEDVFLILDRFRKELGGGFLLS
EDIKELFRKYKWPGNIRELRNVVEYLCFTGHTVITIDDLPPVFCIDKNGEAVDKRKDADQ
NIPVLQKLSQCKNESHLPTVQERAILELLYQAERSGQSIGREKILKEAQMREIRLTQPQV
RKILGRLEENGYVTVTKGRGGSSITKKGVDWITG
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaagtattgcggtaattgcattagacccttttgcgggaaaagcatatgcccag
caggtccggtcagtatttggggaacgggcggtggtacgtaactacagcatgatggatgga
acggcagcaaatatggagccttgcgatttgtatatgggttcaacggatgcgtttgatgcc
atgggagatccaagccggtatattccgccgaaagcacaacggatggaaattcaggttact
tatttaaaggaagcggtacgccgtttggaagagatcccaaaggggacgaaagttctttat
gtgaatatcactgaggttatggcaagggaagcggtgacgcagctggaacaactgggaatt
acccacttaaagtttatcctctatgcgccgggaagcaagctgactgatacagcagagatt
gctgttacaccggatgaagagcgttatgtgcccaggggaattcccacaattatcaatctg
ggacagagaacctgttcttccgatacaatgattgaagctgcgttccggcttggttttgac
gatctgcttgaagaggtggagtttaaacagtatcaggagtctgtatgtaccaatacctat
tattttgaccagatgtttaaccgttccaggagactggaaagtcagtttgatattctcatg
gaggtgctggaccagggcgtcatcgcggtgaatgagcacggagaaatatatgcggtcaac
aaaaatgcggctgatatcacccgggttccggaaaatctcagtatttcaaacgtgggagaa
gaagtgtttccctatatcccattccggaaatgtttggaggagaaaaaggagaccagtccc
caggttgtaagagttgcgggaaatctggtcagcctttacgtgcgtcctgtgttaaggcgg
gaggcttgcgttggtgcgtttgccatattgcagaagtttaatgagatggagcgccgtcag
aacgaactgcgggttcagttaatgaaaaaaggccaggggcatagggctaaatattgtttt
gatgatgtgattgggacatccgaatccatagtaaagactaaatttattttaaataaaatg
gcttctacggaatctccggttttgttaattggtgaaaccggaaccggtaaggagctgttt
gcacactccgttcataatgcttcaaagcgcagagatcaaccgtttgtagcgatcaactgt
gctgctatgccggagaatttattggagagtgagctgtttggttacgaggaaggtgctttt
acaggtgctaaaaagggtggacggccaggcctgtttgaatttgcccatcaggggacgctg
ttcttagatgaagtggaaggcatgagtcctgccttacaggtaaagcttcttcgtgttttg
caggaacgggaaatcatgcgggtcggaggaaatcaaatcattcatgttgatgtgcgtatt
gttgctgcaaccaatgaagagcttgaacaaaaggtggcggaaggaactttccggcaggac
ctttattacagactgaatgccttgccggtattgatcccgccgcttcggaagagaggagaa
gacgtattcttaattttggatcgttttcggaaagaacttgggggaggattccttttaagt
gaggatatcaaagagttgtttcgtaaatataaatggcccgggaatatacgggagctgcgt
aatgtcgtggaatatttatgttttaccggtcataccgtgataacgatcgatgatctgcct
ccggttttttgcatcgataaaaacggagaagcagtggataaaagaaaagatgcagatcag
aatatacctgtccttcaaaagctgtctcagtgtaaaaatgaatcgcatttacccacggta
caggaacgggcaattctggaacttctttatcaagcggaacgttcgggacaatccattgga
cgggaaaaaattcttaaggaggctcagatgcgtgaaatcaggttaacccagcctcaggtg
cgcaaaatattaggcagattagaagaaaacggctacgtaacagttacaaagggcagaggc
ggaagcagtattacgaaaaaaggagttgattggatcaccggttaa
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