Clostridium saccharolyticum WM1: Closa_1870
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Entry
Closa_1870 CDS
T01288
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing)
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
csh
Clostridium saccharolyticum WM1
Brite
KEGG Orthology (KO) [BR:
csh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csh03032
]
Closa_1870
03400 DNA repair and recombination proteins [BR:
csh03400
]
Closa_1870
Enzymes [BR:
csh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Closa_1870
DNA replication proteins [BR:
csh03032
]
Prokaryotic type
DNA Topoisomerases
Closa_1870
DNA repair and recombination proteins [BR:
csh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Closa_1870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
TOPRIM_C
Motif
Other DBs
NCBI-ProteinID:
ADL04452
UniProt:
D9R001
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Position
2018837..2020756
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AA seq
639 aa
AA seq
DB search
MAKTQYNADSITVLEGLEAVRKRPGMYIGSVGTKGLNHLIYEIVDNAVDEHLAGYCDQIW
VTLEADGSCTVKDAGRGIPVEMHSKGVSAERVVLSTLHAGGKFDNDAYKTSGGLHGVGSS
VVNALSAHMKIKVYKNGLIHYDEYERGIPTVELVDGLLPTLGKTKETGTEINFLPDGEIF
EKTRFKADWLKSRLHETAYLNPSLKIIYRNKRQGEEETVVYHEPDGIIAYVRELNAGKEA
VHDPVYFKGTMDKVEIEVALQFVDTFEENILGFCNNIFTQEGGTHLAGFKTRFTQMINSY
ARELGILKEKDANFTGADTRNGLTAVVAVKHPDPIFEGQTKTKLASADATKAVFTVTGDE
LQRYFDRNLEVLKAVIGCAEKSAKIRKAEEKAKTNMLSKSRFSFDSNGKLANCESREAEK
CEIFIVEGDSAGGSAKTARNRQYQAILPIRGKILNVEKASMDKVLANAEIKTMINTFGCG
FSEGYGNDFDISKLRYHKIILMTDADVDGSHIDTLLLTFLYRFMPELIYNGHVFIAMPPL
FKVIPKRGEEQYLYDEKELERYRRTHTGEFTLQRYKGLGEMDAEQLWETTLDPERRVLKQ
VEIEDARMASEITEMLMGSDVLPRRQFIYEHADEAEIDA
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaacacagtataatgcggacagtattaccgtactggaaggtcttgaagcagtg
cggaaacgtccgggtatgtatataggcagcgtcgggacaaagggattgaaccatttgatt
tatgagatcgtggacaatgctgtggatgagcatctggcaggttactgcgatcagatatgg
gttaccctggaagcagacgggtcctgcactgtcaaggatgcaggccggggaattccggtt
gaaatgcacagcaaaggcgtatcggcagagcgtgtggttttgtctacgcttcatgcaggc
ggcaaatttgataatgatgcctacaaaaccagcggcggacttcacggagtgggttcttct
gtagtgaatgccctgtctgcccacatgaaaattaaagtatataaaaatggtctgattcat
tatgacgagtatgagcggggcataccaacggtagaactggtggatggcctgcttcctacg
ttaggaaaaacaaaagaaacgggtacagagatcaacttccttccggatggagagatcttt
gaaaaaacgcgttttaaagcagactggctgaaaagccgccttcatgaaactgcttattta
aatccttctcttaaaatcatctataggaacaaacggcagggagaagaggaaaccgttgtt
tatcatgagccggatgggatcattgcatatgtaagagaattaaatgccgggaaggaagca
gtccatgatcctgtttatttcaagggaaccatggacaaggtggaaatagaggtcgccctg
cagtttgtggacacctttgaagaaaatatcctgggtttctgcaataatatttttacccag
gagggaggaacccacttagcaggctttaagacccgctttacccagatgatcaacagctac
gcaagagaattgggaatattaaaagaaaaggatgctaattttaccggtgcagatacgaga
aatggtctgacagccgttgtggcagtgaagcatccggaccctatttttgaaggccagact
aagacaaagctggccagcgcagatgccacgaaggcagtattcaccgtaaccggcgacgag
ctgcagcggtattttgaccgaaatttagaggttttaaaagcagtgatcggatgtgcggaa
aagtctgcaaagatacggaaggcagaggaaaaagccaagaccaacatgctttccaaatcc
agattctcttttgacagcaatggaaagctggcaaactgtgaaagccgggaagcggaaaaa
tgcgagatctttattgtagagggagattccgcgggaggttctgcgaagactgcccggaac
cggcagtatcaggccattcttcccatccgcggaaagatattaaatgtggaaaaggcttcc
atggacaaggttctggctaatgcggagattaagaccatgatcaacacctttggctgcgga
ttttccgaaggctatggcaatgattttgacatttcaaagctgcggtaccacaaaatcatc
ctcatgacggatgcggatgtggacggaagccatattgatacccttttgctcaccttttta
taccggtttatgccggagctgatttataacggccacgtgttcattgccatgccgccgttg
tttaaggtcattccaaagcgtggagaggagcaatatctctatgatgaaaaagagctggaa
cgctaccgcaggacccataccggagagtttaccttacaacgttataagggtcttggagaa
atggatgccgaacagctttgggaaacgacccttgacccggaacgccgggtattaaagcag
gtggagatcgaggacgcccgcatggcttcagagataacagaaatgctcatgggcagcgat
gtgcttccccggcggcagtttatctatgaacatgcggatgaagctgaaattgacgcatag
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