Clostridium saccharolyticum WM1: Closa_1960
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Entry
Closa_1960 CDS
T01288
Name
(GenBank) ATP-dependent DNA helicase RecG
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
csh
Clostridium saccharolyticum WM1
Pathway
csh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Closa_1960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csh03400
]
Closa_1960
Enzymes [BR:
csh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Closa_1960
DNA repair and recombination proteins [BR:
csh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Closa_1960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecG_wedge
RecG_dom3_C
ResIII
SecA_DEAD
tRNA_anti-codon
Cas3-like_C_2
AAA_30
BT4734-like_N
ATPase
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
ADL04539
UniProt:
D9R0Z2
LinkDB
All DBs
Position
2114020..2116071
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AA seq
683 aa
AA seq
DB search
MNHESINSLKGIGEKTGKLFQKVGVITVEDLLEYYPRAYDTYEEPSPLGELKPDQVMTVA
GMLYKTPDVKRYSHIQVITTTLKDMTGTLLLTWYNMPYLHTTLKAGMRAVFRGRVVKKNG
RLTMEQPEVFTAEAYEQVVHSMQPVYGQTKGLSNKTIVRAQRQALSLRSMVRDYMPADLR
RKHELAEYNFAMEHIHFPTDRSELLFARKRLVFDEFFLFLMAVRRLKERREDKKSAYVLN
LSQEVETLRKSLPYSLTKAQQKVLTEIYGDLSGGRVMNRLIQGDVGSGKTIIAILSLLQA
AYNGYQGALMAPTEVLAKQHLESMTELFAAHHIDKKPILVTGSMTAKEKRIAYEKIASHE
ADIIIGTHALIQDKVIYDNLALVITDEQHRFGVGQRELLGKKGEEPHVLVMSATPIPRTL
AIIIYGDLDISVIDELPANRLPIKNCVVDTGYRKKAYEFIRKEIGNGRQAYVICPMVEAS
EMIDAENVLDYTKTLREALPGITVEYLHGKMKPKEKNGIMERFACGEIKVLVSTTVIEVG
VNVPNATVMMIENAERFGLAQLHQLRGRVGRGKYQSYCIMVGASDQEGTKERLDILNQSN
DGFFIASEDLKLRGPGDIFGIRQSGDLEFKLGDIFTDANLLKTVSEEVKRIFTEDPELEK
EEHQELKRKLKEYLEKSYDKLNL
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccatgaatcaattaattccttaaaaggaattggagaaaaaacaggaaaattgttt
caaaaggtgggagtaataaccgttgaagatcttctggaatattacccgagagcctatgat
acttatgaggagccttctcctcttggtgagctgaagccggaccaggtgatgacggtagcc
gggatgctttataagactcctgatgtaaaacggtacagccacattcaggtcattacaacg
actttaaaggatatgacgggtactctattgctcacatggtacaatatgccttatcttcat
accacgttaaaggcggggatgcgagctgttttccgcggccgggttgtgaagaaaaacggc
cgtctaaccatggaacagcccgaagtttttactgcagaagcctatgaacaggtggtccat
tccatgcagcctgtttacggacaaaccaaggggctgagcaataaaaccattgtcagggcc
caacggcaggctttaagcctccgtagtatggtaagggattatatgcctgcagatttacga
agaaaacatgaactggcagaatataattttgctatggaacatattcattttccgacggac
aggagcgaactgctatttgccagaaaaaggctggtgtttgatgagttttttctttttctc
atggcagtccggcgtttaaaggagcggagagaagataagaaaagtgcttatgtgctgaat
ctgtcccaggaagtggagaccttaagaaaaagtcttccctattcccttaccaaggcccag
caaaaggttttaaccgaaatatacggcgatctgtcgggcgggagggtcatgaaccgtctc
attcagggtgatgtaggctccggtaaaacaattattgccatactctctcttttacaggca
gcttataacggataccagggagcccttatggcgcctacggaggtactcgcaaagcagcat
ctggaatctatgacggagctgttcgctgctcatcatattgataaaaagcccatccttgtt
acgggatccatgacggcaaaggaaaaaaggattgcctacgaaaagatcgcttcccatgaa
gcggatattattatcggcacccatgctcttattcaggataaggtgatatacgacaacctg
gcgttggtaattaccgatgagcagcaccggtttggagtcggccagagggaactgttaggg
aaaaaaggagaggaacctcatgtccttgtaatgagtgccactcctattcctagaaccctg
gccattatcatttacggggatctggacatttctgtcattgatgagctgcctgcaaaccgt
ctgccaattaaaaattgtgtagtagataccggatacaggaaaaaggcctatgagtttata
cggaaagaaatagggaatggacgtcaggcctatgtgatctgtcctatggtcgaggccagc
gaaatgattgatgcggaaaatgtactggattatacaaagaccttaagagaggcccttccg
ggaatcaccgtggaatatcttcacggaaaaatgaaaccaaaagagaaaaacggcatcatg
gagcgcttcgcctgcggggaaatcaaggtcctggtttccaccactgtgattgaagtcggt
gtcaacgttcccaatgcaacggtcatgatgattgaaaatgcggaacgctttggcttggcc
cagcttcaccagctaagagggcgtgtggggcgtgggaaataccagtcttattgtattatg
gtaggagcctcggatcaggaggggacaaaagaacgcctggatattttaaaccagtccaat
gatggtttttttattgcctcggaggatttaaagcttcggggaccgggtgatattttcggt
atcagacagagcggggatctggaatttaaactgggggatatttttacagatgcgaatctg
ttaaaaactgtatcagaggaagtaaagcggatttttacagaggatccggagctggaaaaa
gaagaacatcaggagctgaaaagaaagctgaaagagtatcttgagaaaagctatgataag
cttaatttgtaa
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