Clostridium saccharolyticum WM1: Closa_2042
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Entry
Closa_2042 CDS
T01288
Name
(GenBank) penicillin-binding protein transpeptidase
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
csh
Clostridium saccharolyticum WM1
Pathway
csh00550
Peptidoglycan biosynthesis
csh01100
Metabolic pathways
csh01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
csh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Closa_2042
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Closa_2042
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
csh01011
]
Closa_2042
Enzymes [BR:
csh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Closa_2042
Peptidoglycan biosynthesis and degradation proteins [BR:
csh01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Closa_2042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
RGS
Motif
Other DBs
NCBI-ProteinID:
ADL04621
UniProt:
D9R174
LinkDB
All DBs
Position
complement(2194702..2197578)
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AA seq
958 aa
AA seq
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MIQQLFSDLLDIIKDYFKKAVSSRLFILGTICFFMYAGLINKLFSMQIVNGEEALNEYLQ
LTEQTITTAGTRGNVYDRNGKVLAYNKLAYSVTVQDTGVYKNSSARNSMYLRLVQILERH
GETIQGKFEVAIDSNGDMVYTSSSESSRKRFLRDYYGLKKVEDLDDAKGSFPSNLSAREL
FDRACKDNGLSDMKDPDGNAINLTDQEALDIINIKYALRLMSYRKYEATTVASQVSDETV
ADILEHIGEMQGVNVEETTIRAYNDSIPFAPVIGYTGKVPEDQLEGLQKKKDDYDINDIV
GRTGIEYTMEHELQGTKGKKTIYKDSVGRIRETKDETDASAGNDVYLTLDADLQKGIYHL
IEQSLAGVLIKTIVNGDYRAGTTTDGSNMKIPVKDAYYQLINNNVLSLKEMEEEDASETE
KNIYRKYMSSQQQIFNNLNNELMSTHATAMKDLSEDMKAYMFYIYTYLSGPTVGIIKEDA
IDTSSGEYQAWKTDEISLRDYLYYGIANGWVDTTKLETGAKYSSADDTFKALIGYVLDNL
KEDRNFTKKIYRYLINDEVITGQELCLALYDQGVLQDNGQDAAELRATGDAYAFLIKKLS
TLEITPAQLALTPCNAGVVVTNDKTGEVLALVSYPGYDNNRIGDGSYFSQLQADLSLPLY
NNATQTRKAPGSTFKPITAVAALEEHAVTTDETINCTGIYTDVEPPIKCWIYSGQHGPLN
IVGGIENSCNFFFADLGHRLSTDASGVYSPDLGLDVLRKYAAMFGLDHKSGVEIAELDPQ
ISKEAPERSAMGQGSHAYTNVQLSRYVSAIANRGTVFELSLLDKTTDSEGNLIQDYTPKI
SSHIDAAASTWDTVQQGMREVITNGSSKRLFSDLEVEIAGKTGTAQEARNKPNHAFFISY
APYDNPEICVTVNIPYGYSSSNAANIAKNVYKYYYGYTDLESIINAGALDAAKVNIRD
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
gtgattcagcaattgtttagtgatttattagacatcataaaggattattttaaaaaagcg
gtatcttcccggctttttatacttggaaccatctgctttttcatgtacgcaggtttgata
aataaactattcagcatgcagattgtcaatggtgaagaggctcttaatgaatatttgcag
cttacggagcaaaccattacaacggccggaacaagaggtaatgtctatgaccggaacggc
aaagtcctggcttataacaaactggcctattccgtaaccgtacaagatacgggagtttat
aaaaactcctccgcaagaaacagcatgtacttaagactggtgcagatcttagaaaggcac
ggggaaaccatacaaggaaaatttgaggtcgccattgattccaacggcgatatggtttat
acatcttcctctgagtcctccagaaagcgttttctcagggactattacggcctgaaaaag
gtggaagacctagatgatgcaaagggctcctttccctccaatttaagtgccagagagctg
tttgaccgggcttgtaaggacaacggcctgtcagatatgaaggatccggatggaaatgcc
attaatctgacagaccaggaggccctggacatcatcaacataaaatatgctcttcgcctc
atgtcttaccgcaaatatgaagcgactacagtggccagccaggtttctgatgaaaccgta
gcggatattctggagcacatcggggagatgcagggagtgaatgtggaggaaaccaccatc
cgggcatacaatgacagcattccctttgcacctgtcatcggctataccggtaaggtccct
gaggatcagctggagggcctgcagaaaaagaaagatgattatgatattaatgacatcgta
ggacgtacaggaatcgaatataccatggagcatgagcttcagggcacaaaagggaaaaag
actatttacaaggacagtgtaggaagaatccgtgaaacaaaggatgaaaccgatgcatcc
gccgggaacgacgtatatctgaccctggatgccgatcttcagaaaggcatttaccatctg
atcgaacagtccttagccggagttctaattaagaccatagtgaacggggattaccgtgcg
ggcaccaccactgacggttccaatatgaagatccccgttaaggatgcctattatcagctg
atcaacaacaatgttctttccctgaaggaaatggaagaggaggatgcctctgaaactgaa
aaaaacatataccgtaaatatatgtcttcccagcagcagattttcaacaatttaaacaat
gagctgatgagcactcatgccacggctatgaaagatctttcagaagacatgaaagcctat
atgttttatatttacacctatctttccggtcctaccgtgggaatcatcaaggaagacgcc
attgatacctccagcggagaatatcaggcctggaaaacagatgaaatcagcttaagagac
tatttatattatggaattgccaatggctgggtggacaccaccaagctggaaaccggtgct
aaatattccagtgcggacgacacatttaaagcccttatcgggtatgtgctggacaattta
aaggaggaccggaattttaccaaaaaaatataccgttatctgatcaatgacgaggttatc
acgggtcaggaactatgccttgctttatacgaccagggcgtactgcaggacaatggacag
gatgccgcagagctgagggctacaggtgatgcctacgctttcctgatcaaaaagctgtcc
accctggaaatcacacctgcccagttggctttaactccctgtaatgcaggtgtggtggtt
acaaacgataaaaccggagaggtgctcgcccttgtttcttaccctggatatgacaacaac
cggattggtgacggcagctatttcagccagcttcaggcggatttgtcccttcctttgtac
aacaatgccacccagacaagaaaggcgcctggttctacgtttaagcctatcactgcggtt
gccgctctggaagaacatgctgttacaacggacgaaaccattaactgtaccggtatttac
acggatgtggaaccgcccattaaatgctggatctattccggtcagcatggacccttaaac
attgtagggggaattgaaaattcctgtaactttttctttgccgatcttggtcaccgttta
tcaacagatgccagcggagtatattctcctgacttaggacttgatgtcttaaggaagtat
gctgccatgttcggtctggatcataaatccggagtggagattgcagagctggatccccag
atttccaaagaagcaccggagcgttctgccatgggacagggaagccacgcttataccaac
gtccagctttccagatatgtttcagccattgcaaaccggggaaccgtgtttgaactaagt
ttattggacaagacaacggattctgaaggcaatctgatacaagattatacccctaagatt
tcttctcatattgacgcggcggcttcaacgtgggatactgtacaacaaggaatgagagaa
gtgattaccaatggttcaagtaaaaggctgttttcagatcttgaagtggaaattgccggt
aagaccggtaccgcccaggaggcccgcaacaaacccaaccacgcattctttatttcttat
gcgccatatgacaatccggaaatctgtgttaccgtgaatattccgtatggctattcatca
tccaacgccgccaatattgcgaagaatgtctataagtattattatggctacacggactta
gaatccattataaatgccggcgccctggatgcagcgaaggtcaacattcgcgattaa
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