Clostridium saccharolyticum WM1: Closa_2052
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Entry
Closa_2052 CDS
T01288
Name
(GenBank) RNA modification enzyme, MiaB family
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
csh
Clostridium saccharolyticum WM1
Brite
KEGG Orthology (KO) [BR:
csh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csh03016
]
Closa_2052
Enzymes [BR:
csh01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
Closa_2052
Transfer RNA biogenesis [BR:
csh03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
Closa_2052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
Bmt2
Pox_EPC_I2-L1
FAM186A-B_N
Motif
Other DBs
NCBI-ProteinID:
ADL04631
UniProt:
D9R184
LinkDB
All DBs
Position
complement(2207480..2208928)
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AA seq
482 aa
AA seq
DB search
MNDINMTYEEALSHAPQEEPARQYFFIERCQDILENLKEVSGKEQLTFHIATFGCQMNSR
DSEKLQGILEAIGFVEHDTEEADFVLYNTCTVRENANDRVYGRLGYLNSLKKKNPYMMIA
LCGCMMQEEEVVAKIKKSYRFVDIIFGTHNIFKLAELMYERLEEKKMVVDIWEGTDRIVE
DLPTERKYSFKSGVNIMFGCNNFCSYCIVPYVRGRERSRSPKDILEEIKQLVNDGVVEIM
LLGQNVNSYGKTLDTPVSFAELLTQIDQVEGLERIRFMTSHPKDLSDELIKAMKNSKKVC
HHLHLPLQSGSSRILKVMNRKYTKEQYLELVEKIRTAIPDISLTTDIIVGFPGETEEDFN
ETLEVVRKVRFDSAFTFIYSKRTGTPAAKMEEQVSEEAIKNRFDRLLDEVKNISSEVCGR
EVHTVQKVLAEEVNDHEEGLLTGRLGNNTTVHFKGDSSLIGKIVDVYLDESRGFYYMGTL
RP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatataaatatgacttacgaagaagccctcagccatgccccccaggaggagcct
gcaagacaatacttttttatagaacgctgtcaggatattctggaaaatttaaaggaagtc
tcaggaaaagagcagcttacctttcacatcgccaccttcggctgccagatgaattccaga
gattccgaaaagcttcaagggatcttagaggccatcgggtttgtggaacatgacacggaa
gaggctgactttgttctttataatacttgtaccgtcagagaaaatgccaatgacagagtc
tacggacgtcttggttatttaaacagcttaaaaaagaaaaatccttatatgatgattgct
ctttgcggctgcatgatgcaggaagaagaagtagttgcaaagatcaaaaagagctaccgc
tttgtggatattatttttggcactcataacatctttaaactggcagagcttatgtatgaa
cgcctggaagaaaaaaagatggtggttgacatctgggagggaacggaccggattgtggag
gatctccccacggaacggaagtactcctttaaatccggcgttaatattatgtttggatgc
aacaatttctgcagctactgcatcgtgccttatgtacggggcagggaacggagccgcagc
cccaaagacattctggaagagataaagcagctggtaaatgacggcgttgtagagatcatg
cttttagggcaaaacgtcaactcatacggaaagaccctggatacacccgtaagctttgca
gaacttctgacccagatcgatcaggtggaaggcctggagcggatccgctttatgacttcc
catccaaaggatttgtcagacgaactgattaaagccatgaaaaattcaaaaaaggtttgc
caccatcttcacctgcctcttcagtcaggcagcagccggattttaaaggtcatgaaccgg
aaatacaccaaggaacagtatctggagcttgtagaaaaaatccggacagccattccggat
atttctctgaccacagatatcattgtaggattccccggcgagacagaagaagattttaac
gaaactcttgaagtggtgagaaaggtacgttttgacagcgcctttacttttatctactcc
aaacgtaccggaacaccggcagcaaagatggaggaacaggtttctgaagaagcaataaag
aaccgttttgaccgtctgctggatgaagtaaagaacatctcctctgaggtctgcggaaga
gaggtacacaccgttcagaaggtacttgcagaagaagtgaatgatcatgaggaaggtctt
ttaaccggccgcttaggtaataacactaccgttcattttaagggagattcttctctgata
ggaaaaatcgtggacgtatatctggatgaatccagaggattttactacatgggaacttta
aggccataa
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