KEGG   Clostridium saccharolyticum WM1: Closa_2110
Entry
Closa_2110        CDS       T01288                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
csh  Clostridium saccharolyticum WM1
Pathway
csh02024  Quorum sensing
csh03060  Protein export
csh03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:csh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    Closa_2110
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Closa_2110
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Closa_2110
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:csh02044]
    Closa_2110
Enzymes [BR:csh01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     Closa_2110
Secretion system [BR:csh02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   Closa_2110
  Eukaryotic Sec-SRP protein
   Closa_2110
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin CbiA ParA AAA_22 AAA_33 APS_kinase cobW AAA_31 AAA_17 AAA_30 Thymidylate_kin NPHP3_N nSTAND3 AAA TsaE ArsA_ATPase
Other DBs
NCBI-ProteinID: ADL04689
UniProt: D9R239
LinkDB
Position
complement(2268834..2270183)
AA seq 449 aa
MAFESLSDKLQNVFKSLRGKGRLSEADVKTALKEVKMALLEADVSFKVVKQFISAVQERA
IGQDVQNSLTPGQMVIKIVNEELVKLMGSETTEIRLKPAGDMTIIMMAGLQGAGKTTTTA
KIAGKLKAKGRKPLLVACDVYRPAAIKQLQINGEKQGVPVFSMGENHKPADIAKAAIAYA
AKNDQNVVILDTAGRLHIDEDMMNELIEIKGTVEVHQTILVVDAMTGQDAVNVAGMFNDK
IGIDGVIITKLDGDTRGGAALSIRAVTGKPVLYVGMGEKLSDLEQFYPDRMASRILGMGD
ILSLIEKAELQVDEEKAKELSQKLRKAEFDYNDFLDQMSQIKKMGGMASILGMMPGMGQM
KDMDLDERAMDRVEAIILSMTSKERLNPDLMKNASRKQRVAKGAGVDIGEVNRIVKQFDQ
MKKMMKQLPGMMGGGKRHGGMFGKLKLPF
NT seq 1350 nt   +upstreamnt  +downstreamnt
atggcttttgagagcttatccgataaattacagaatgtatttaagagcttaagaggcaag
ggacgtttgtccgaagccgatgtaaaaacagcccttaaagaagtgaagatggctttactg
gaagccgacgtaagctttaaggttgtgaaacagtttataagtgccgttcaggagcgggcc
attggacaggatgtccagaacagcctgactcccggacagatggtaataaagattgtaaat
gaagagctggtaaagctgatgggctctgagacgactgagatccggctaaagcccgccggc
gatatgaccatcatcatgatggcaggccttcagggtgccggaaaaaccaccacaactgcc
aagattgcaggaaagcttaaggcaaaggggagaaagcctcttctggttgcctgtgacgtt
tatcgtccggctgccattaagcagctgcagatcaacggagaaaagcagggggttcccgtg
ttttccatgggagaaaaccacaaaccggcagatattgcaaaggccgctattgcttacgcg
gcaaaaaatgatcagaatgtagttattctggatacggcaggtcgtcttcatattgatgaa
gacatgatgaacgaactgatcgaaatcaaagggacggttgaggttcatcagaccatcctg
gtagtagatgccatgacagggcaggatgcagtaaacgtagcaggaatgtttaatgataag
atcgggattgacggtgtcattatcacaaagcttgacggtgataccagaggcggtgcggcc
ctttccatccgtgcggtgaccggaaagccggttctttatgtaggcatgggagaaaagctt
tcggatctggaacaattttatcctgaccgcatggcttcccggatacttggtatgggagac
atcctatctctgattgaaaaagccgaattgcaggttgacgaagagaaagcaaaggaactg
tctcaaaagctccgcaaggccgaatttgattataacgatttcctggatcagatgagccag
ataaagaaaatgggcggaatggcaagcattttaggcatgatgcctggcatgggccagatg
aaggacatggatcttgatgaaagagccatggatcgggtggaagcaattattctttctatg
accagcaaggaacggctgaatccggatcttatgaaaaatgcttccagaaagcagcgtgtt
gcaaaaggagcaggcgtggacatcggtgaggtaaaccgcattgtaaagcagtttgaccag
atgaaaaagatgatgaaacagcttcccggtatgatgggcggcggaaaacgccatggggga
atgtttggcaaattgaaattgccgttttaa

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