Clostridium saccharolyticum WM1: Closa_2221
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Entry
Closa_2221 CDS
T01288
Name
(GenBank) ABC transporter related protein
KO
K18888
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
csh
Clostridium saccharolyticum WM1
Pathway
csh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
csh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Closa_2221
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csh02000
]
Closa_2221
Transporters [BR:
csh02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Closa_2221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
MMR_HSR1
AAA_22
AAA
Rad17
AAA_23
AAA_18
AAA_28
ATP-synt_ab
NTPase_1
DUF87
AAA_29
Dynamin_N
AAA_15
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ADL04799
UniProt:
D9R350
LinkDB
All DBs
Position
complement(2390157..2391902)
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AA seq
581 aa
AA seq
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MDMKKYRSTMKRILGCISRYQWGVAASLACAFVTVILTLYVPILTGRAIDCIAGAGAVDF
PRMWKILKQIGIITAITAASQWLMSHINHWVTYRVVKDIRTQAFNKLEILPLKYIDSHSH
GDMINRIIADIDQFSDGLLMGFTQLFTGVLTILGTLVFMFSMNPAITIVVVLVTPVSLFA
AGFIARRTYRMFKMQSQTRGELTSLVEEMLGNQKVVKAFRHEADAQEQFENINEELRIWS
LKATFFSSITNPATRFVNSLVYASVGIAGAIASINGLLSVGQLASFLSYANQYTKPFNEI
SGVVTELQNALASAARVFELIDAKPQVPEDPDAAVLNNARGEVSLEHVYFSYNPEVPLIE
DMNLKVLPGQRIAIVGPTGCGKSTVINLLMRFYDVTCGSIQVDGTDVRHMTRQSLRTNYG
MVLQETWLKSGTIRENIAYGNPEASEEEIILAAKEAHAHGFIRRMPQGYDTVISEDGGNL
SQGQKQLLCIARVMLCLPPMLILDEATSSIDTRTEIKIQKAFSKMMEGRTSFIVAHRLST
IREADVILVMRDGHIIEQGTHESLIFQNGFYAQLYNSQFAV
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggatatgaaaaaatacagatccaccatgaaacggatcctgggctgtatcagccggtac
caatggggagttgcagcatctctggcctgcgcctttgttactgtcatcctgactttatat
gttcccatcctcaccggccgtgccattgactgcatcgcaggagcaggagccgttgatttt
ccccgcatgtggaagatcttaaaacaaatcgggatcatcactgccataactgctgcctcc
cagtggcttatgagccatatcaatcattgggtgacttaccgtgtggtaaaggatatcagg
acccaggcatttaataagctggaaatactgcctctaaaatatattgactctcattctcac
ggagatatgataaacaggatcattgcagatattgatcagttttccgacgggctgttaatg
ggttttactcagctttttaccggggttctcacaattctcggaaccctggttttcatgttt
tccatgaatccggccataaccattgtcgtggtgctggtaactcctgtctctctgtttgca
gccggttttatagccaggagaacctaccggatgtttaagatgcagtcccagaccagaggg
gagctgacttctcttgtggaagagatgctggggaaccagaaggtagtaaaggccttccgc
catgaggccgatgcccaggaacagtttgagaatatcaatgaggaattgcggatatggagc
ctcaaagccacattcttctcatccattactaatccggcgacacgttttgttaacagtctt
gtttatgccagcgttggaattgcgggagccattgcctcaattaacggacttttatccgtt
ggccagcttgccagttttttaagctatgccaatcaatacacaaaaccatttaatgaaata
tcaggagtggtcactgaacttcaaaatgcccttgcctctgcggcgcgggtgtttgaattg
attgacgcaaaacctcaggttccggaggaccctgacgctgcagttctcaacaatgcaagg
ggagaagtatcactggagcatgtatacttttcctataacccggaggtacccttaatcgaa
gatatgaatttaaaggtattgcctggccagaggatcgccatcgtaggccctaccggatgc
ggaaaaagcacagtgatcaatctgcttatgcgcttttatgacgtaacatgcggctcgatc
caggtagatggaaccgatgtacggcatatgacaaggcagagcttaagaaccaattatggc
atggtgcttcaggaaacgtggttgaaatccggtaccattcgagaaaacatcgcctatgga
aatccggaagcttcggaggaggagatcatactggctgcaaaggaagcccatgcccacggt
tttatcagacggatgccccagggatatgacaccgttatatcagaagacggggggaattta
tcccagggccagaagcagcttttatgcatagccagagttatgctgtgtcttcctcctatg
ctgatccttgacgaggccacctcatccattgataccagaacagaaataaagatacaaaag
gcttttagcaaaatgatggagggccggaccagctttattgtagcacaccggctttctacc
atcagagaagcggatgtgatattggtcatgcgagatggccatatcatcgaacagggaact
catgaaagcctgattttccaaaatggattttatgcacagctttataacagccagtttgct
gtgtaa
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