Clostridium saccharolyticum WM1: Closa_2350
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Entry
Closa_2350 CDS
T01288
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily
KO
K03091
RNA polymerase sigma-E/F/G factor
Organism
csh
Clostridium saccharolyticum WM1
Brite
KEGG Orthology (KO) [BR:
csh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csh03021
]
Closa_2350
Transcription machinery [BR:
csh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Closa_2350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
HTH_3
Sigma70_r4_2
HTH_31
HTH_19
MarR_2
HTH_6
HNF-1_N
HTH_37
HTH_25
HTH_23
HTH_17
Trp_repressor
KORA
HTH_24
HTH_Crp_2
HTH_28
Rep3_N
GerE
Motif
Other DBs
NCBI-ProteinID:
ADL04923
UniProt:
D9R3H4
LinkDB
All DBs
Position
complement(2524928..2525668)
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AA seq
246 aa
AA seq
DB search
MIIKVSVPNRFQFKAIPTFKTLMMPNQGEIHYIGGADILPPPLDNEKEAQIIALLGSDDD
QRAKSELIEHNLRLVVYIAKKFDNTSVGVEDLISIGTIGLIKAINTFNPNKNIKLATYAS
RCIENEILMYLRRNNKTKMEVSIDEPLNVDWDGNELLLSDILGTEEDVIYKDLETEVERN
LLNTAISRLSPRERKIVELRFGLTDEEGEEMTQKEVADLLGISQSYISRLEKKIMKRLKK
EIVRFE
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgattataaaagtgtccgtaccaaaccgttttcaatttaaggcaattccaacatttaaa
acgctgatgatgccaaaccagggagagatccattacataggaggagcagatatccttcct
ccgcctctggataatgaaaaagaggcgcagatcattgcccttcttggaagtgatgacgac
cagagggctaaatccgagttgattgaacataatctccggcttgtggtctacatagcgaag
aagtttgataacaccagtgttggggtggaggatttgatttccataggaaccatagggctc
attaaggccattaatacctttaatcccaacaaaaacatcaagctggctacctatgcctcc
cgctgcattgaaaacgaaatactcatgtatctgcgccggaacaataagacaaaaatggag
gtttccattgatgaacctttgaatgtggattgggatggcaacgagctccttttatcagat
attcttggaactgaggaggatgtgatttataaagatttagaaaccgaggtggaacgaaac
ctgctgaataccgctatcagccgcttaagccctagggagcggaagattgtggagcttcgg
tttggattaacagatgaggaaggagaggaaatgacccagaaggaagtggcggatttattg
ggcatttcccagtcctatatctccagactggaaaagaaaatcatgaagagactgaaaaaa
gaaatcgtacggtttgaatga
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