Clostridium saccharolyticum WM1: Closa_2442
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Entry
Closa_2442 CDS
T01288
Name
(GenBank) transcriptional regulator, RpiR family
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
csh
Clostridium saccharolyticum WM1
Brite
KEGG Orthology (KO) [BR:
csh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csh03000
]
Closa_2442
Transcription factors [BR:
csh03000
]
Prokaryotic type
Helix-turn-helix
Other families
Closa_2442
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
DUF2529
HTH_Crp_2
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
ADL05011
UniProt:
D9R4E1
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Position
complement(2634530..2635384)
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AA seq
284 aa
AA seq
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MQENISVSGVLCSSYDSFFEAEKKIADYILAHKSEIIDMTVAELALASGTSDATVSRFCR
RCGFNGFHHLKINLAKEVAEERGNSIEVSNDISRDNIGQSLQNILANKVAELTQTISMMD
PDELNRILSVIEGARTIQLVAVGNTIPVAMDGSFKFNQLGIPAVSGSIWETQMAYTCNLR
EEDAIIIISNSGFSKRLMTLVAVAKENHTPTIAITNNASSPLGQVCDYHITTATREKLLL
GEFCFSRVSATTVIEILYLFLSVSRPDSHDRIRRHEIAISDDKK
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaaaatataagcgtatccggggttctctgctcatcctatgattcgttttttgaa
gcagaaaagaaaattgcggattatattctggctcataaaagtgaaatcattgatatgaca
gtggcggagctggccctggcaagcggaaccagcgatgccaccgtgtccagattctgcaga
agatgcggttttaacggatttcatcatctgaaaatcaatctggcaaaggaagtggctgag
gaaagggggaattccattgaagtctccaatgacatcagccgggataatattggccagtcc
cttcagaatattttggccaataaggtggcggaactgacccagaccatatccatgatggac
ccggatgagttaaacaggatcctttctgtaatcgaaggtgccagaaccatacagcttgta
gctgttggaaataccataccggtggcaatggatggctcctttaagttcaaccaactgggg
atacctgccgtatccggctccatatgggaaacgcagatggcttatacctgcaatttgagg
gaagaggacgctattatcatcatatccaattcaggcttttccaagcggttgatgaccctg
gtggcggttgccaaggagaaccatacgccaaccattgcgattaccaacaacgcgtcatcc
cctcttggccaggtctgtgactatcacattaccacggcaaccagggaaaaactccttttg
ggagagttttgcttttccagagtgtccgctaccacagtgatcgaaattttgtatctgttt
ttatcggtcagcagaccggattcccatgaccgtatcagacgtcatgagattgccatttcc
gatgataaaaaataa
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