Clostridium saccharolyticum WM1: Closa_2535
Help
Entry
Closa_2535 CDS
T01288
Name
(GenBank) ABC transporter related protein
KO
K14698
ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
Organism
csh
Clostridium saccharolyticum WM1
Pathway
csh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
csh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Closa_2535
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csh02000
]
Closa_2535
Transporters [BR:
csh02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Closa_2535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_23
ABC_ATPase
AAA_29
AAA_22
RsgA_GTPase
AAA_30
AAA_15
nSTAND1
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
ADL05104
UniProt:
D9R4Z7
LinkDB
All DBs
Position
complement(2740908..2742731)
Genome browser
AA seq
607 aa
AA seq
DB search
MNQKKSSAAKPKTGMARLMELAATKKPLMVSSIILSGLASVASFIPYIAIYFVVKEVMGV
FPEFENLKLQRTIGYGWLAFGGIMLNVLLYFAALVCSHLAAFGTLYELKINFASHLAGLP
LGFHMLVGSGKLRKIMDENIEKIEGFIAHQLPDLVASFVAPVVMLVILLAVDWRFGLAAA
AGIVIALGIQIKAYGNDGAKAMMEKYQSALEDMNNASVEYVRGITVVKAFKQTVYSFRRM
HSAIKEYTRMVIPYTLSWENYMSLFHTVINNIYLFLIPVGILIGINTSDYSGYAATFIFY
LIFVPSIASVLMKIMYVSTGGMQILGGVERMDEILQAPQLSLPQNPKEISSHEIVFENVA
FSYFGQDAQALSHISFRAEENQITAIVGPSGGGKSTIAHLIPRFFDVTEGRIRIGGVDVR
QMRSEYLMEKVSFVFQDVFLFKQSIMDNIRLGNQSATDEQVIAAAKAAQCHEFIEKLPEK
YHTVIGTKGVHLSGGEQQRIAIARAIVKDSPIVLLDEATAFSDPENEHLIQQAFQRLMHG
KTVIMIAHRLSTIRSAGKIVVVDKGRIIEQGRHEELLAKQGKYFDMWNVYTKAIDWKMDR
KGMKEHA
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaaaaaaatcttcggcagctaagcccaaaaccggtatggccaggttgatggag
cttgcggctaccaaaaaacctttgatggtttcttccataatcttatcggggctggcctct
gttgcctcgtttatcccgtatattgccatatactttgtggtgaaggaagtcatgggtgtg
tttcctgaatttgagaatttaaaactgcaaaggaccattggatatggctggctggctttt
ggggggattatgctcaatgtattgctgtattttgcggctttggtatgctctcatctggct
gcgtttggcacgctgtatgaactgaagataaactttgcttctcatcttgcagggctgcct
ctggggtttcatatgctggtgggaagcggtaagctgagaaagattatggatgagaatatt
gagaagatcgaaggcttcatcgcccatcagctgccggatctagtggcctcctttgtagct
ccggtggtcatgctggtcattcttcttgcagtggattggcgctttgggcttgctgctgca
gccggaattgtcatcgcccttgggatccagataaaagcctatggcaatgacggggcgaaa
gctatgatggaaaagtaccagagcgccctggaggatatgaacaatgcttccgtggaatac
gtccgtggaatcaccgttgttaaggcttttaagcaaaccgtctattccttccgccggatg
cacagtgccattaaagaatacacccggatggtcattccttatacgttaagctgggaaaac
tatatgtcattgtttcacacggtcattaataacatttacctgttcctgattcccgtggga
atcctgatcgggataaatacatcagattattccggctatgctgccacgttcatcttttat
cttatttttgttccctctattgcttccgttttgatgaagatcatgtatgtttccaccgga
ggcatgcagatcttgggaggagtggagcgcatggatgagattctgcaggctccgcagctt
tctctgcctcaaaatcctaaggaaatttccagccatgagatcgtttttgaaaatgtggcc
ttttcctactttggccaggacgctcaggcactttctcatatctccttccgggcggaggaa
aaccagattactgccatcgttggcccttcaggaggtggaaagagtacaatagcccatctc
atcccccggttttttgatgtgacagagggaaggatccggatcggaggcgttgatgtgcgt
caaatgagaagcgaatacctgatggaaaaggtcagctttgtattccaggatgtgttcctt
tttaagcaaagcattatggacaatatccgtcttggaaaccagagtgccactgacgagcag
gtgatcgcagccgccaaggcagcccagtgccatgagtttattgaaaaacttccggaaaaa
taccatacggtcattggcacaaaaggcgttcatctctcaggaggagaacagcagcgcatt
gcaatcgccagagccattgtaaaagattcacccattgtgcttttggatgaagcgaccgca
ttttcagaccctgagaacgagcatttgatccagcaggcatttcaaaggctgatgcatggg
aaaaccgtgattatgattgcccaccgtttatcaaccatccgcagcgcaggcaagatcgtc
gtggttgacaagggccggataatagaacagggccgccatgaggaattactggcaaagcaa
gggaaatactttgatatgtggaatgtgtataccaaagcgattgactggaagatggacaga
aaggggatgaaagaacatgcgtag
DBGET
integrated database retrieval system
