Clostridium saccharolyticum WM1: Closa_2972
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Entry
Closa_2972 CDS
T01288
Name
(GenBank) Extracellular ligand-binding receptor
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
csh
Clostridium saccharolyticum WM1
Pathway
csh02010
ABC transporters
csh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
csh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Closa_2972
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Closa_2972
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csh02000
]
Closa_2972
Transporters [BR:
csh02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Closa_2972
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
Peripla_BP_4
Bmp
Motif
Other DBs
NCBI-ProteinID:
ADL05506
UniProt:
D9R774
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All DBs
Position
3211917..3213095
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AA seq
392 aa
AA seq
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MKLKKVFALTLAACMSASLIAGCSSGSSSSASGGAKVVKIGVFEPTTGENGGGGFQEVLG
MRYANKTHPTVKIGGEEYKVELVEVDNKSDKTEAVNAAQKLVSEKVSVVLGSYGSGVSIA
AGQIFADAKIPAIGASCTNPQVTQGNDFYFRVCFLDPFQGTVMANYANDNGAKAAAIITQ
LGDDYSSGLGSFFKTAFTGLGGTIVSEEQFQTNQTDFKAILTNIKAQNPDIIFAPSSITT
APLIIKQARELGITATIAAGDTWENSTIIENAGNSAEGVVLSTFFDEAEPANEEAASFIS
GFKAYLKDNKQDEIIPAVSALGYDAYLCALKAIETAGSAEGAAIRDALKDVSIDGVTGSI
SFDENGDAKKDMAFIKTIEGGKFKFLTTTTVK
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgaaaaaagtatttgcactcactcttgcagcatgtatgagcgccagcctgatc
gccggctgcagctcgggttcctcttcttccgcttccggcggggcaaaggtcgttaagatc
ggtgtatttgaacctaccaccggagaaaacgggggcggcggtttccaggaggtactggga
atgcgctacgcgaacaagactcatccaacggttaaaatcgggggagaagagtataaggtg
gaattagtggaggtggataacaaatccgataaaacagaagcggtcaatgcagcacagaaa
cttgtaagcgaaaaggtttccgttgtgcttggcagctacggttccggcgtttccatagcc
gctggacagatttttgcagatgccaagatccctgccattggagcctcttgtaccaaccct
caggtaactcagggaaatgatttttatttccgggtatgtttcttagatcccttccagggt
acggtcatggctaactatgcaaacgataatggagcgaaggcggctgccatcattacccag
cttggagatgattattcctccggcctcggttccttcttcaaaacagcatttacaggctta
ggcggtaccattgtaagtgaagaacagttccagaccaaccagaccgatttcaaggctatt
cttacaaatatcaaggcacagaatcctgatatcatttttgcaccatcttccattaccacg
gctccccttatcatcaagcaggcccgtgagcttggaattacagctaccattgctgccggt
gatacatgggaaaactccaccatcattgaaaatgcaggcaactctgcggaaggcgtagta
ctttccaccttctttgacgaggcagaaccggctaacgaagaagcagcttccttcatctcc
ggctttaaggcctatttaaaagacaacaagcaggatgagatcattccggcagtatctgca
cttggttatgatgcttacctctgtgcattaaaagccattgaaacagcaggctccgcagaa
ggtgctgctatccgcgatgcattaaaggacgtatccattgacggtgttaccggaagcata
tccttcgatgaaaacggagatgcaaaaaaagacatggccttcatcaagaccattgaaggc
ggcaagttcaaattcttaactactactacggtaaaataa
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