KEGG   Clostridium saccharolyticum WM1: Closa_2979
Entry
Closa_2979        CDS       T01288                                 
Name
(GenBank) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
csh  Clostridium saccharolyticum WM1
Brite
KEGG Orthology (KO) [BR:csh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:csh03016]
    Closa_2979
Enzymes [BR:csh01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     Closa_2979
Transfer RNA biogenesis [BR:csh03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    Closa_2979
 Prokaryotic type
    Closa_2979
SSDB
Motif
Pfam: TruB_N TruB_C_2 TruB-C_2 PUA_3
Other DBs
NCBI-ProteinID: ADL05513
UniProt: D9R781
LinkDB
Position
complement(3219079..3219984)
AA seq 301 aa
MADGIINVYKEQGFTSHDVVAKMRGILKQKKIGHTGTLDPMAEGVLPVCLGKATRLCDML
TDKTKTYEAVMLLGRETDTQDTTGTVLAEYPVLVDDSMAEEAVLSFLGHYDQIPPMYSAL
KVDGKKLYELARAGKEVERKARPVEILDIHVDRMELPRVTMTVTCSKGTYIRTLCYDIGR
KLGCGGCMESLLRTQVSGFYLKDSLTLSRIQELRDEGTLENHILAVDKVFSEYPAFRMKP
DFDKLVHNGNPFYRSQAEGDSRLPDGPVRVYDSKGQFIGVYGPDREKNLLKPQKVFLGGT
T
NT seq 906 nt   +upstreamnt  +downstreamnt
atggcagacggcatcattaatgtatacaaggaacaaggatttacctctcatgacgtcgtg
gcgaaaatgagaggtattttaaagcagaaaaaaatcggccatacaggaaccctggatcca
atggcagagggagtacttcccgtatgcctgggaaaggcgaccaggctttgtgatatgttg
acggataagacaaaaacctatgaggcagtcatgcttttaggcagagaaaccgatactcag
gataccacgggaacggtactggcagaatatccggttctggtagacgattccatggcagag
gaagcggttctcagttttcttggtcattacgatcagataccgcctatgtactcggcttta
aaggtggatggaaaaaagctttatgagctggcaagagccgggaaagaagtggagcggaag
gccaggcctgtggagattctggacattcatgtggaccggatggaacttccgcgggttacc
atgacagtgacttgctccaaaggaacctatatccggactctttgttatgatattggcaga
aagctcggctgcggagggtgcatggaatcccttctccgcactcaggtttccggattttac
cttaaggacagcctgaccctttcccggatccaggagcttcgggatgaagggacgttggag
aatcacatccttgcagtggacaaggtgttttcagaatatccggccttccggatgaagccg
gattttgataagctggtacacaatggaaatcccttttacagatcccaggcagagggggat
tcccgtttgccggacggtcctgttagggtatatgacagtaaaggccagtttatcggagtt
tacggtcctgacagggagaaaaatcttcttaagccacaaaaggtatttttgggagggacg
acttaa

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