Clostridium saccharolyticum WM1: Closa_3189
Help
Entry
Closa_3189 CDS
T01288
Name
(GenBank) Substrate-binding region of ABC-type glycine betaine transport system
KO
K05845
osmoprotectant transport system substrate-binding protein
K05846
osmoprotectant transport system permease protein
Organism
csh
Clostridium saccharolyticum WM1
Pathway
csh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
csh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Closa_3189
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csh02000
]
Closa_3189
Transporters [BR:
csh02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Osmoprotectant transporter
Closa_3189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
BPD_transp_1
SurA_N_3
Motif
Other DBs
NCBI-ProteinID:
ADL05719
UniProt:
D9R8J0
LinkDB
All DBs
Position
complement(3431683..3433248)
Genome browser
AA seq
521 aa
AA seq
DB search
MNFWNYILSNYPQILSLLIEHLKLTAVSVGLAILIGVPLGIFISYAAKASKPVLSVANVI
QAIPSMALLGFLIPLLGIGIIPAIVAVVLYSLLPIIKNTYTGIENINPQTLEAARGIGLT
PFQVLTKVQIPLALPVIMAGVRIASVTAVGLMTMAAFIGAGGLGYLVFSGIRTVNNNQIL
AGAVPACLLALMVDFLIGLVEKLVTPVSLQKGDRSVKVKRRNAQKAVLAAASGLLAVVFL
FTSVGTVSGNTRTISVGSKDFTEQEILGNMVADLIEDRTDIAVSRKLSLGGSQVCFSAIK
TGDIDLYMDYSGTSYSDILKHPPISDMEQVYQTVKKEYKEQLHLEVLKQMSFNNTYTLAV
TQEMAESHHLNKISDLAGIAGTLVSGTTFEFSNRKDGLSGLQKTYGFQMGKSLTLDAAPR
YTALKNGEINVIDAFSTDGLLKKFDLKTLEDDKGFFPPYYAIPVVREEVLEECPEITGIM
EELAPVLTNDVMIELNYKVDELQQTPADVARDFLKEKGLIS
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgaatttctggaattatatcttaagcaattatccgcagatcttatccttgttgattgaa
catctgaagctgaccgccgtatcggtgggtctggcgattctcattggagtccctcttgga
atttttatttcctatgcggcaaaagccagcaaaccggttttgtcagttgcaaatgtgatc
caggccattcccagtatggctcttttaggcttcctgatcccattgctggggatcggtatt
attccggccattgttgcagttgttctttattctctgcttcccattataaaaaacacctat
acaggaattgaaaatattaatccccagaccctggaggctgccagaggaatcggtctgacg
ccgtttcaggtgctgacaaaggtgcagattccccttgctcttccggtcatcatggcagga
gtaaggatcgcttccgtaacggcggtggggctgatgaccatggcagcatttattggtgca
ggcggactgggatatctggtattttccggcatccggacggtgaataacaatcagatcctg
gcaggagctgttcctgcctgtttattggccctcatggtggactttcttattggtctggtt
gagaagctggtaacgccggtcagcttacagaagggagaccgttctgttaaggtaaaaaga
aggaacgcacagaaggcagtgcttgcagcggcctcagggcttttggctgttgtatttctt
ttcacatctgttggcacagtatctggaaatacacgtaccatatccgtagggtccaaggat
tttacggaacaggagatccttggaaatatggtagcggacttaatcgaggacagaaccgat
attgccgtaagcagaaagctgagcctaggggggtcacaggtgtgtttctccgccataaaa
accggggacattgatctttatatggattacagcggcacctcctacagcgatattttaaag
catcctcctatcagtgatatggagcaggtatatcagaccgtgaagaaggagtataaagag
cagcttcatctggaagtgctgaaacagatgagctttaataatacttatacactggccgtg
acccaggaaatggcagaaagccatcacttaaataagatcagtgatcttgccggtatcgcg
gggaccctggtatccggcactacctttgagttctccaaccggaaggatggactgtcggga
ctgcagaaaacgtatggcttccagatgggaaaaagccttaccttagatgctgctccacgg
tacaccgctttaaaaaacggtgaaatcaatgtcattgatgccttctccaccgacgggctt
cttaaaaaattcgacttaaaaactctggaagatgataagggattttttcctccttattat
gcgattccggttgtccgggaagaagttttggaggaatgcccggaaattaccggaatcatg
gaagagctggctccggttttaaccaatgatgttatgattgaactgaactataaggtagat
gaattgcagcagactcccgctgatgtggcaagagattttctgaaagaaaaaggattgata
tcatga
DBGET
integrated database retrieval system
