Clostridium saccharolyticum WM1: Closa_3341
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Entry
Closa_3341 CDS
T01288
Name
(GenBank) YD repeat protein
Organism
csh
Clostridium saccharolyticum WM1
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
DUF6443
Motif
Other DBs
NCBI-ProteinID:
ADL05870
UniProt:
D9R9B9
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Position
complement(3596181..3601694)
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AA seq
1837 aa
AA seq
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MDDKKIIKDYMNKNKWEVPDTKTEEDVSSGEENEAKSRETRFSRAALPTEKEEFSDIKQY
PESPFTYFETNQVNVQLSTGNVQYETTDFVLPGRDGFDVSIARRYDSGCANLMDMDPYVK
DNKLKTGSKDNSFYAKTYGLGYGWSFVLPSIETVPYLKCSFMVVPVDPPKSILMGLPAFD
YFLHLEDGRSLKISRSSDSFVDHTLKDIRIITRSGMIHHPYAAGITKAYDIIIEYKNGNK
DYFKNLYGNDGDRDKLTPQKFTLAARQDKFGNVICYDLKDYGGMVIVDTWGRTISLEKTD
YGLIWRLPESTTGKTCELSYQIDQTQPLKLTGVTDPAGRKTQYNYYNPEDYKGVMSYASK
KAVGNTTGNRVRNYLLLKSVTYPNLASTQLTYGREISIVNDAGGKLTHFALTMKKDLAEG
SEYNRAEYRYRLDSGVSYEYGNGTYIEYAEVKHRQDILETHQFDGEGQLINKEVRYQNAL
ISKGVYQYSNKLLVSAVDQVFDRNNKSQFLKKETNWTYSSDQKANVIKYKETYPDDHSSD
QEINTSYDVYSIVLETERKKGSDLIIEKNELHEDLGKRVIKYHLVYENGVLKEKTEYDYK
DGANPYCVTNERKYFLADSGNLEQSGEYAETIYKYSSPSSANSRYTHSVISKEQSDIRDA
DGKLCDPIKKEFQYDNWGRLISKKDSRNQVTTYRYDELGRIVAETLPLVDGQQDIKETYY
NDHLNYITETDANHQKRRIQYTPFGQIQQVCLAVSKEPTSGDVVLQDFRYNSWGELTEAV
TYDGNGTATDNIRKTERYTYDSFGRVLSRTIPQVGYEEKYEYHEVFTDPDGIKYLREVKK
VIGDASAPDIVTECYKDQKDQVRKEILAGKKVFSYEYDNAGNNVRKIDAGNNVERWEYDY
AGRIVKSIRTDSGQERITSIQYDGLGNKRFQWDEAGKKTVFQYDKAGRLVQITTPFDHRS
RIVKYYYDGAGNIIGEKKEQKDGWQETQYVYDARNRLTDTYQYLSPGNWIKTTCRYDVMN
QVILRRTGDTPSGEGREVTKYTYDRFGNVTAMTDARGSTEYYEYDKAGRLQKKMDRNKDQ
TVYQHDALERLLKETVQKRTPDGMVISEREYAYGKNGKRIREVSRESVGGKQTALLETKY
LYNHKGQLARQEDPGNVRKDYTYDIYGNRLSFQLTREGKASPDVGLYYTYDDLYRLKQVR
KDSAAGVILAEYEYDEKGNRKTLRYPQSGMETVYQYNDGNRVISLENKRQGTVISAWEYG
YDVDGNILSKINKAGSSPVAISYQYDRLGRLTEEDYSGWKRTLYTYDAYSNRVKMMVEGR
TKDELVRVTSYEYGLNNRLEKETNKQGKITETYRYRYDENGNETFRIWEKTAPTPDYPGN
VRLSGTYRKEVPTVYEWRHYDGFNQLSRINQDDKEITYQYRGDGLRHSAEVRKLTESQGK
TNLYCWDGSDIVAEVTDSSKIKTYLRGINVIASEIDRVVYYYIFNEHGDITQLWSQSGTC
KASYKYDAFGVERNPDKEDENPFRYCGEYIDLETNTYNLRARYYRSVTGRFLNEDIVENT
IRKMPNEQIVTDPLSLNKYTYCHNNPIMYHDPSGYAAIPSWLKTAAKIALGVVIVGAAVV
LSAATLGVLPSVALTAVATGAAIGAGAGVLADVGVQYFTNGMSFKNYNIDSTIIAGVQGG
VSGAFGMTNFGVGYQVFANTATAGIGSALKGDSTKDIIFNTVVGGFAGWAGGSGSGPKGL
RYSELRAWKVSTGLYLKGLIKSTVVSNGFGVIKLYAEEMWNNINNMLKSNNNAMRDGSAA
SRTFTNYNGTVVEQSQNIKERALRQLNKTYYKYKLAF
NT seq
5514 nt
NT seq
+upstream
nt +downstream
nt
atggacgataaaaagattataaaggattacatgaataaaaataaatgggaagtgcctgat
acaaagacggaagaggacgtatcaagcggagaagagaatgaagcaaaaagccgggaaaca
cgatttagccgggcagcactgcctacggagaaggaagaattttccgatataaaacagtat
ccagaatccccatttacctattttgaaacaaatcaggtaaatgttcagttaagcaccggc
aatgttcaatatgagacaaccgactttgtactgcccggcagggatggctttgacgtatcc
attgccagacgctatgattccggatgtgccaatttaatggatatggatccatatgtcaaa
gataataagctaaaaacaggttctaaagataacagtttttatgccaaaacttatgggctg
ggatatggctggtcctttgtcctgccatccattgagactgtaccgtatcttaaatgttct
tttatggtagtaccggttgatcctccgaagtcaattttaatgggacttcccgcttttgat
tattttctgcatctggaagacggcagaagtttaaagataagccggtcctcagactcattt
gtggatcatactctaaaagatatcaggattatcaccagatcaggtatgattcaccaccca
tatgcagccggtattacaaaagcttatgatattataattgaatacaaaaatggtaataaa
gattattttaaaaatttatatggaaatgatggagacagggataaactgacgccccagaag
tttacactggctgcccggcaggacaagtttggaaatgtgatttgttacgatttaaaggat
tatggcggtatggtgatagtagacacctgggggcgtacaatcagcttggaaaagaccgat
tacggacttatctggagattgccggaaagcacaacaggaaaaacatgtgaactttcctac
caaatcgatcagacgcagcctcttaagcttaccggagtaacagaccccgcaggccgtaag
acacagtacaactactataatccagaagattacaagggagttatgagttatgcctccaag
aaagcagtaggaaatactactggaaatagggtacgcaattatttgctgttaaagagcgtc
acatacccaaatcttgcatccactcagttgacatatggcagggaaatcagcattgtaaat
gatgccggtggaaagcttacccattttgcattgacaatgaaaaaggatcttgctgaagga
agtgagtacaaccgggcagaatacaggtacaggcttgattccggagtttcctacgagtac
ggcaatggcacgtatatcgaatatgcagaagtaaaacatcgtcaggacattttggaaacc
catcagtttgatggggaaggacagctaataaataaggaggttcgttatcagaatgccctt
atttcaaaaggcgtttatcaatatagtaataaactactcgtgtcagccgttgatcaggta
tttgacaggaacaataaatcccagtttctgaaaaaggaaaccaactggacttattcctcc
gatcaaaaagcaaatgtcattaagtataaggaaacctatccggatgaccattctagtgat
caggaaatcaatacaagctatgatgtctacagcatcgttcttgaaacagaaagaaaaaaa
ggctctgacctgatcatagaaaaaaatgagcttcatgaggatttgggaaagcgagttata
aaatatcatctggtctatgaaaatggagtcttaaaagaaaagacagaatatgattataag
gatggggcaaatccctactgtgtgaccaatgaaagaaaatacttcctggcagacagcggg
aacctggaacagtcaggtgaatatgcggaaacgatttataaatacagctctccttccagt
gctaacagcagatacacacatagcgttatatcaaaagaacaaagcgacatccgagatgca
gacggcaagctctgtgatccaattaagaaagaattccaatatgacaactggggaaggctt
atctctaaaaaggattccaggaatcaggtaactacctaccgctatgacgaactgggacgg
attgtagcagagacgctgcctctggtagacggccagcaggacataaaggaaacctattat
aatgaccatttaaactatatcacggaaacagatgcgaaccaccagaaaagaagaattcaa
tacacaccatttgggcagattcaacaggtctgtcttgccgtatccaaggaaccgacttcc
ggcgatgtcgtgcttcaggatttccggtataattcatggggagagcttacagaagcagtc
acttatgatgggaacggcacagcaacggataatataagaaaaacggaacgttatacttac
gattcttttggccgggtgctgtcccgcacgattccccaagtgggctatgaggagaagtat
gaataccatgaggtatttaccgatccagatggaataaaatacttacgcgaggtaaaaaaa
gtcataggagacgcctccgctccggatatcgtgacagaatgttataaagaccaaaaagac
caggttaggaaggagatcttagccggaaagaaggtgttttcctacgagtatgacaatgca
ggaaacaatgtccggaaaattgatgccgggaacaatgtggaacgctgggagtacgattat
gctggccgcatcgtaaaatccatacggacagactccggccaggagcgaattaccagcatt
caatatgatgggcttggcaataaacggttccaatgggatgaagccggaaagaagacagta
ttccaatacgataaggcaggacgtcttgttcagatcaccacgccgtttgaccaccgcagc
cggattgtaaaatattactatgatggagccggaaatatcataggggaaaaaaaggaacaa
aaagatggatggcaggagactcagtatgtttatgatgccaggaaccgactgaccgatacc
taccagtacttaagcccgggcaactggattaagaccacctgccggtatgatgtgatgaat
caggtcattctaaggaggaccggggataccccgtccggcgaagggcgggaggtaacaaaa
tacacctatgaccgctttgggaatgtcacggcaatgactgatgcccgtggtagtacggaa
tactatgagtatgacaaagccggaagactgcagaaaaaaatggacaggaacaaggaccag
actgtttatcagcatgatgccctggaacgcctgctaaaagaaaccgtgcaaaagagaacg
cctgatggtatggtaattagcgagcgggagtatgcctatggaaagaacggcaagcggatt
cgggaagtcagccgggaatctgtggggggaaaacaaaccgccctcctggagacgaagtac
ctctataatcataaaggccagctggcccgccaggaggatccgggaaatgtgaggaaggat
tatacttatgatatatatggaaaccgcctgtcctttcaactgacccgagaagggaaagca
agccctgatgtcggtctgtattatacgtatgatgacttatatcgtttaaagcaggtaaga
aaagacagtgctgccggggtgatattggcagagtacgaatatgatgaaaaaggcaaccgt
aaaaccctccgctatccgcagtccggtatggagaccgtctatcagtataatgatggtaat
agggtaatctctctggagaataaacggcagggaaccgtgatttctgcatgggaatacggc
tatgatgtggatgggaatattctaagtaagatcaacaaagccggttcttccccagttgcc
atatcctatcaatatgaccggctgggccgtctgacagaagaagattattctggatggaag
cggacgctttacacctacgacgcctattccaaccgtgtaaaaatgatggtggaaggaaga
acaaaggatgagttggtccgtgttaccagctatgaatatggtttgaacaaccggttggaa
aaggaaacaaataagcaggggaaaataacggaaacgtaccggtaccgttatgatgagaat
ggaaatgaaaccttccggatttgggagaaaacagcccctacgccggactatccgggaaat
gtcaggttatcggggacctatcgaaaagaggttccaacggtttatgagtggagacattat
gatggattcaaccaactgagccggatcaatcaggatgacaaagagattacatatcagtac
cggggagatggcctgcgccacagtgctgaggtgcggaaactgaccgaaagccaggggaaa
acaaatttatattgctgggatggaagcgatattgtagcggaagtgactgatagtagcaag
attaaaacctatttaaggggaatcaatgtaattgccagtgaaatagatcgtgtggtatac
tattatatatttaatgaacatggggatataacccaactgtggagtcaaagcggaacgtgt
aaagcctcgtataagtatgatgcttttggagtggagagaaacccagataaggaggatgaa
aatccgtttcggtattgtggggagtatatagacttagagacgaatacctataacttaaga
gcaaggtattatagatctgtgactggtcgattcctaaatgaagacattgttgaaaataca
atccgaaaaatgccaaatgagcagatagtcaccgatccgctcagcctgaataagtatacc
tattgtcacaataatccaattatgtatcatgatccaagtggatatgctgcaataccatca
tggttaaagacagctgctaaaatagcattaggtgtggtgatagttggtgctgcagtagta
ctgtcagctgcgacacttggagtattaccatcagtagcgttaacagctgttgcaacgggg
gcagctattggtgctggggcaggtgttttagctgatgttggggttcaatatttcactaat
ggtatgtcttttaaaaactataatattgatagtacaattattgcaggcgttcaaggtgga
gtgtctggagcatttggaatgacaaattttggagtaggatatcaagtgtttgcaaatacc
gcaactgcgggaattggatcagcattaaagggagatagtactaaggatattatttttaac
acagtagttggaggttttgcaggatgggcaggtggttcaggatcaggaccaaaaggttta
cgttactcggagttacgtgcatggaaagtatctacaggattatatttaaaaggtttaata
aagagcacagttgtttctaatggctttggagtaataaagctttacgctgaggagatgtgg
aataatattaataatatgttgaaaagtaacaataatgcaatgagagatggttctgcggct
agcaggactttcacgaattataatggtactgtagtggagcaatcccagaacataaaagag
agagcattaagacaattgaataaaacctattataaatataagctagcattttaa
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