Clostridium saccharolyticum WM1: Closa_3497
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Entry
Closa_3497 CDS
T01288
Name
(GenBank) Peptidoglycan-binding lysin domain protein
Organism
csh
Clostridium saccharolyticum WM1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLH
LysM
Glug
Flg_new
Big_4
Motif
Other DBs
NCBI-ProteinID:
ADL06023
UniProt:
D9RA51
LinkDB
All DBs
Position
complement(3771096..3778469)
Genome browser
AA seq
2457 aa
AA seq
DB search
MKKRILSIWLSVCMVLTMLPISAMAEQSGTPIGAKGEIIAFAPLDETERSVSTGTAMEDL
GLPESLTATVRTAVTADSGTSEDAVHDSGNPDKGSVSGNLAEATPGSAAPTDSDGQSETD
KVTGVEWKETTVDIPVTWTSEPEYDMDTEGVYVFAPVIEGYAVSAELPEITVTVSTQPLM
MALRGGTPTTYGDFSVTVDEDGAAPIFANGILTFGTAGEYTIGMIEGKTSTSNVIVVSAS
DVMLNLDGVTIEAPDGSAAKVDGGNALTVTSDSVILNLLNDSSFTGGIGGIVDPMNACNG
GSGISGNVTLTGTATLTATGGIGGAAALGTSGTGGAGISGNVTVTGAAALTATGGIGGAA
ALGTSGIGGPGISGNVAATDSASLIAIGGQYGGGIANGGSGISGSLTVTDYATVSLEGGL
SLSTPGSALTGTLTATGFIIKGGYFSEMDVITSDDYRLNQFRYLSVAPAPNVAEIGSTGY
PTLQAAVDAVDEGQTIKLTDAITITDSSSITINGANSFTLDLNGKTLADDGSGSTSLIKH
NGSGTLTIQDSGTGGKMTSSRSVGSNGGTVELSGGNGALTLLSGTIENTSASGAGIFNNG
TGTVSIQDGIVRAEACSVNNKSGNVSVSGGVVSANKYLSAAILSSAGKVTLSGGSIYNPT
YVGVGLSNSSLVVSSGSPIIQGGVAAMNAAPTVDSDTIAKVIASTNYDGNNPVENYNASQ
ITSYKYLTFAVKIPPATFDFCNGIATVSVKPSSDPAWGGTGYAFAGWYTAPNGEGTALTG
DGDSGITYYAKWTYNGHTVRTTALNLTDISTSKLYGSTQNGNVYTNTAEGWTWYAVQTTV
GSEIYAANTLVLSDLTLNTTAPTALKVPSSATVVLGDGTTSTIQSGNVTAGAVYGIYGAG
DLTVSGGGALSVTAGDSGFDEDDQSIGILSSGALTVNGGTVTSISGKAVESYGMMSVGTL
TIDSDAVTGAGGLSVAGAGIFSLDNLTITGGTIAGSSDGMLAGYGIFATGEIAITGDTVT
GNGGGIMGCGISADEISITGGTVTAKNNAIDGDGNPLSAATAIETTTTLTIGSSAKSAAI
ANATDGTSAITASGGTVASKKLVMSGSDAVVISFALPTAAQYAAASPAAAPDTDYVLDTS
GKTLTIKTAKGAAWWSANGSTYRDYTIKLDADIDVSGFLWTPVGNDAGVFGGTFDGQGHS
LSGLTITAANGGYTGLFGSALSATIQNLCVSGTINVTETGGSLYMGGIAGGIGGNSTIRN
CGSHVNIRGTASNGDEVNAGGIVGYLSSGTIENCFNTGDVFGTGAAMVIAGGIYGANSQY
TSNIGTVKNSYNTGSVTGSGSSINWIGALAGSVDSNTVFEHSYYLVGTATAASGHGSGTG
YSSFAAGTADGLITALNGWVSEKASTAYSTWQADNADSPVNGGWPVFGAAWTAPPAPTIG
TLTISDSFTAGNGIQPSGLTSYKPTVTSNGVDLTAEGWQSSITFSGDSDDWENWPDGTIL
SPTTTRIYKLRYYVTYDSTTIYSNAVTLDVVGHTTTLALAASPESPQIVGSSITLTATLT
GYFTGPGVNGQAITFKNGSTDLGTANLNASGVAVFTWTPGGTGTCVLTAEYAATAYNTAA
ASSTVNYIVIVDPDIAIVAAAKTAAQGTSYADMTQTAATDEDAIKAALKNTAETAVNNSD
ITVTINKVSYIAPIAGTPANPSGTNGSYTFTVTVSKGSQSDTTVQKTIVITATPYTGVTD
AQAVSAAKTALVDGTVNVAFGADQTAKTAAVQAYVNGLLSGNAAGVTATVTYNSGTGKYD
VALSKGSVNDSKSLSMTVNVAPDPDIAIVAAAKTAAESASYANMTQAAAPNESTIKTALK
STAETAVSNGSVAVTINQISYIAPIAGTSANPSGTNGSYTFTITVSKGSQSETTAQKTII
ITATPYTGGTGGGGGNGGGSGSGSNTPAPSTKPTEPVTGNTENKATVDGKGNANVSLTDK
NITDAIADAKAEAAKKGVNAGDITAVIHVTTGGKDANTVTVNLPKTTQEQVIDNKISSVQ
LVIDRPDLTIGINLAAVTEINRQAKADVQLSATRMDNAKLSGDAKAAIGNRPAFDLKATY
GSGKSVTDFGKGSVSVEIPYTLQKGEIAGNVYAVYVDAKGKVTYLTDSSYDARRGTVVFS
TSHFSTYGIAYKASFNFTDINGHWAKDDILFVANRGLMTGTSATTFNPNGSMTRGMFVTA
LGRLADADVSGYTKSSFTDVKANAYYMGYIEWGVKNNILVGIGGGKFDPDGLVTREQMAV
IMDRYATAIGFKLPEVHAQNTFADNAKIGAWAAPSVKRIQMAGIIQGKSNNLYDPQGTAT
RAEVSAVLKRFVELAIFNDTAQGWSMNDSGQWMYYENGKPIIGKKDIGGTTYTFDQYGVT
ADVPKDRAYSTYTVQRGDSFWTIARKFNCTMAELERLNNKSRFSIIFPGDVLRVPKK
NT seq
7374 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaagaattttaagtatttggctatcggtgtgcatggttctgactatgttgccg
atttcggctatggcggaacaatcaggtacgccaataggcgcaaagggcgaaatcattgca
tttgcaccgcttgatgaaacagaaaggtcggtatcaaccggcacagctatggaggattta
gggcttccagaaagcctgacggcaacggtgcggacagcggtgactgccgacagcggcaca
tcggaggatgctgtccacgattcaggaaacccggacaagggctccgtatcgggtaatttg
gcagaagcaacccccggttccgccgcccctacagattccgatgggcagtcggagacagac
aaagtgaccggagtcgaatggaaagaaacaaccgtagacattccagtcacatggacatcc
gagccggaatatgacatggatactgagggcgtttatgtattcgcaccggtgatagaaggc
tatgcggtgagcgccgagctgccggaaattaccgttacggtaagtacgcaaccacttatg
atggctcttcgcgggggtactcccactacctacggcgacttttcggttaccgtagatgaa
gatggagctgcgccgatatttgcaaacggaattttgacgtttggcacggcgggagaatat
accataggcatgatcgagggaaaaacctccacctccaatgttatcgtagtcagtgcgtcg
gatgtgatgctgaaccttgacggtgtgacaatcgaagccccggatgggtcagcagcgaag
gttgacggtggtaacgcacttacggtaacaagcgatagcgttatcctgaatcttctaaat
gatagctcttttaccggcggaatcggtggaattgttgatcctatgaatgcctgcaacggc
ggcagcggaatcagcggaaatgtcacgcttaccggcacagcgacgctcaccgccaccggc
ggcataggtggagcggctgcactgggtaccagcggtaccggcggggctggtatcagcggg
aatgtcacggttacaggagcggcagcactcactgctaccggcggcataggtggagcggct
gcactgggtaccagcggtatcggcggccccggtatcagcgggaatgtcgccgctacagac
agtgcatcgctcatagccattggcggtcagtacggaggcggtatagcaaatggcggcagc
ggcatcagcggtagccttaccgtcacagattacgccacagtaagcttagaaggcggctta
tctttgtctactcccggcagcgcgctgaccggaacattgaccgccacgggctttatcatc
aagggcggatattttagtgaaatggatgttataaccagcgacgactatcgtctcaatcaa
tttcgttatctctccgttgcacctgcgccgaacgtcgccgaaatcggcagcacaggttac
cccaccctgcaagcggcggtagatgcggttgatgaggggcagaccattaaacttacagat
gctattacgatcacggattcgtcttcgattaccatcaacggcgcaaacagcttcactctt
gacttaaacggcaaaacgctggctgacgatggtagcgggagtacttccctgatcaagcac
aatggctccggtacgctgaccatccaggacagcggcaccggcggaaaaatgacaagcagc
cggtctgttggcagcaacggtggaactgttgaactgtccggcggaaacggtgccctaact
ctcctcagcggcacaattgaaaacacctccgccagcggtgcaggtatctttaacaacggc
acgggcacagtgagtattcaagacgggatcgtaagagctgaggcgtgtagtgttaacaac
aagagcggcaacgtaagtgtttccggcggtgtggtatcagccaataaatacctttctgct
gcgattttaagcagcgctggtaaggtaacgctttccggcggtagcatttataatcctact
tatgttggcgttggcctgtctaacagtagccttgtcgtttccagcggttcgcccattatt
cagggaggggttgctgcgatgaatgccgctccaaccgtagacagcgataccattgcaaaa
gtgattgcaagcaccaactacgatggaaacaaccctgtggaaaactacaatgcgtctcaa
atcacatcgtacaagtaccttacctttgcggtgaaaatacctcctgctactttcgatttc
tgcaatggcatagccaccgtaagcgtgaaacccagctctgaccctgcatggggcggcaca
ggctatgcctttgcgggctggtacactgcgcccaacggcgaaggaacggcacttaccggc
gacggcgacagtggcattacttattacgctaaatggacctataacggtcacaccgtccgc
actacggcgctaaatttgacggacatcagcacatccaagctctacggttcaacccaaaac
ggcaatgtttacaccaacaccgccgagggatggacatggtacgccgtccaaaccacagtc
ggcagtgaaatatacgccgccaacaccctcgttctctccgatctgacccttaataccacc
gcgcctactgccctaaaggttccaagcagcgcaaccgttgtgctgggtgacggtacgaca
agcaccattcagagcggcaatgtcaccgcaggagctgtctacggcatttacggcgcaggc
gatctgactgtgagcggcggcggcgccctaagcgtcaccgcaggcgatagcggttttgat
gaggacgatcaaagcataggaattcttagcagcggtgcgctgaccgtgaacggaggcacc
gttacgagtatcagcgggaaagctgttgaaagctatggcatgatgagcgttggcactctg
accattgacagcgacgctgttacaggtgctggtggactttcagtagccggtgccggcatc
ttcagccttgataatctgacgattaccggcggtaccattgcagggtccagtgatggtatg
ttggcgggctacggcatctttgccacaggtgaaatcgcaatcaccggcgataccgttaca
ggcaatggcggcggtattatgggctgcggtatctccgcagacgaaatctcaattaccggc
ggtacggttactgctaaaaacaacgcgatagacggagatgggaatccgctatcagcggca
acggcaattgagaccaccacaacgctcaccataggtagctccgcaaagtctgccgcgatt
gcaaacgccaccgacggcacaagcgcaattacagcaagcggcggcacagttgccagcaaa
aagctcgtcatgtccggcagtgatgccgtggtcatcagcttcgccctgcctactgcggcg
caatatgcggcggcatccccggcggcggcacccgacaccgactatgtgctggacaccagc
ggaaaaactctcaccatcaaaaccgccaagggtgcggcgtggtggagtgcaaacggatcg
acttatcgggattacaccatcaagttggacgccgacatcgacgtctccggcttcctctgg
acgccggtgggaaatgacgccggtgtgttcggcggcaccttcgacgggcaggggcacagc
ctttcgggactgaccatcacagcagcaaacggaggctacaccggtctgttcggaagcgcg
ttgagcgcgaccatccaaaatctctgcgtttccggcaccataaatgtgacagaaacaggc
ggctcactgtacatgggcggcattgccggcggtattggcggcaacagtaccatccgtaac
tgtggcagccatgtgaatatccgcggcactgcgtccaatggagatgaagtcaatgcgggc
ggtatcgtgggatatctgagcagcggcacaatagaaaactgctttaacaccggagatgtg
ttcggcaccggcgctgcaatggtgatagcaggcggtatctacggtgcaaacagccaatat
acctccaatattggaacggttaagaacagctataataccggtagcgtaacaggtagcggt
agctcaataaattggattggcgcactggctggtagtgtggacagcaacaccgtgttcgag
catagctattatttggtcggcacggcaaccgcagcttctggacatggcagtggaacaggc
tacagcagctttgcggcagggacagcggatgggctgatcaccgccctcaacggctgggtc
agcgaaaaagccagcactgcttattccacatggcaggctgacaacgcagacagccctgta
aacggcggctggccggtgttcggcgcggcatggactgcaccgcctgcgcccaccatcggc
acactgaccatttccgactcctttacagcggggaatggtatccagccgagcggccttaca
agctacaagcccaccgtaacgagcaatggcgtggatcttacggcggagggttggcagagt
tccatcacctttagcggcgacagcgatgattgggagaattggccggatggcaccattctt
tcccctaccaccacacggatttataaactgcgctattatgtgacgtatgacagtacgacg
atctactccaatgcggtaaccctggatgtggtcggacacacgaccacccttgcgctggcg
gcatctcccgaaagcccgcaaatcgtgggcagttccatcaccctgaccgcaaccctcaca
ggttactttaccggtcccggtgtaaatgggcaggcgattacttttaagaacggtagcaca
gatctgggtacggcaaacctgaatgccagtggtgtggctgtctttacatggacacccggc
ggcacaggaacctgtgtcttgaccgccgagtacgccgccactgcttataacaccgccgcc
gcctcaagcacggtcaactacatagtgattgttgacccggatattgcaatcgtcgctgcg
gcgaaaaccgctgcacagggtacaagctatgctgacatgactcagactgcggcaaccgat
gaggacgctattaaagcggctctgaaaaatactgcggaaacggcggtcaataacagcgat
attacggtcaccataaacaaggtaagctacatcgcaccgattgcgggaactcctgcaaat
cccagcggtacaaacggcagctacacctttaccgttacggtatccaaaggcagtcaaagt
gataccactgtgcagaaaaccattgttattacggcaacgccttataccggtgttaccgat
gcacaggcagtctccgcggcaaaaacggctttggttgacggaacggtcaatgtcgcattc
ggcgcagatcagacggcaaaaacagccgccgtgcaggcttatgtgaatggtctgctttcc
gggaatgccgcaggggtgaccgcaactgttacctacaacagcggaaccgggaagtatgac
gttgcactctccaagggcagcgtgaatgacagtaaaagcctttccatgaccgtgaatgtt
gctcctgacccggatattgcaatcgtcgctgcggcgaaaaccgccgccgagagcgcaagc
tatgccaacatgacccaagcggcggcacccaatgagagcacaatcaagaccgctttgaag
tcaaccgcagaaacggcggtgagtaacggtagcgttgcagtcaccataaatcaaatcagt
tacatcgcaccgattgcgggaacctccgcaaatcccagcggcacaaatggcagctacacc
tttaccatcacggtgtctaagggtagtcaaagcgaaaccaccgcgcagaaaaccatcatc
atcacggcaactccctatacgggaggaactggcggtggtgggggtaatggcggcggatcc
ggcagtggttccaatacacctgctccgtccactaagcccaccgagccggtcacaggcaat
acggagaacaaggccacagtggacggtaagggcaacgccaacgtcagcttgactgataag
aatatcaccgacgccattgcggatgcaaaggccgaggcggcaaaaaaaggcgtgaatgcg
ggcgacatcacggcggtgatccatgttaccaccggcgggaaggacgcaaacacagtcaca
gtcaatctgcctaagaccacacaggagcaggtcatcgacaacaagatttccagcgttcag
cttgtcattgaccgtcccgaccttaccataggcatcaaccttgcggcggtaaccgagatt
aaccgtcaggcgaaggccgatgtacagctttccgccacccgcatggacaacgccaagcta
tccggcgatgcaaaggccgccattggcaaccgaccagcttttgacctcaaggcaacctac
ggcagcggaaaatccgtgactgattttggcaagggcagcgtcagtgtagagattccttat
accttacaaaaaggcgaaattgcgggcaatgtctatgccgtgtatgtggacgcaaaaggc
aaagtgacctatctcaccgattccagttatgatgcaaggcgcggaacggtggtgttttcc
accagccatttctctacatacggtatagcctacaaagctagcttcaactttacagacatc
aatggccattgggcaaaggatgatattctctttgtcgcaaaccgtggcctcatgaccggc
accagcgccaccacgttcaaccccaacggttccatgacacggggtatgtttgtaacagcg
ctcggacgtttggcagacgccgacgtgagcggctatacaaagagcagctttaccgatgtg
aaagccaatgcctattacatgggctatatcgaatggggcgtaaaaaacaacatactggtc
ggcatcggcggcggcaaattcgacccggacggtcttgtgacccgtgaacagatggcggtt
attatggacaggtatgccacggctatcgggtttaagctgccggaagttcatgcacagaat
acctttgccgataacgccaaaattggtgcatgggcggctccttccgtaaagcgcatccag
atggcaggcatcatccaaggtaagagcaataatctctacgacccgcagggaacggccact
cgcgccgaggtatcggcggtgttgaagcgtttcgtggagttggcaatttttaacgacacg
gcccaaggctggtcgatgaacgacagcggccaatggatgtattatgaaaatggcaagccc
attattgggaaaaaggacatcggcggcacgacctatactttcgaccagtacggtgtgacg
gcggatgtgccgaaagaccgggcttattccacctacacggtacagcgaggcgacagtttc
tggacgattgcccgtaagtttaactgtacgatggccgagctggagagactgaacaataaa
agccgattctctattatcttccccggtgatgtactccgagtgccgaagaagtaa
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