Clostridium saccharolyticum WM1: Closa_3731
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Entry
Closa_3731 CDS
T01288
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
csh
Clostridium saccharolyticum WM1
Brite
KEGG Orthology (KO) [BR:
csh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csh03016
]
Closa_3731
Enzymes [BR:
csh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Closa_3731
Transfer RNA biogenesis [BR:
csh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Closa_3731
Prokaryotic type
Closa_3731
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
ADL06251
UniProt:
D9QZM5
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All DBs
Position
complement(4042244..4043269)
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AA seq
341 aa
AA seq
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MKRVKMIVAYDGTNYCGWQIQNNGITIEEVLNKELTSLLKEPITVIGASRTDSGVHSEGN
VAVFDTENRMPADKICFALNQRLPDDIRILQSQEVRPDYHPRKQNCVKTYEYKIMNRKIE
VPTLRLYSYFCYFPLDVERMREGGAYLVGEHDFKSFCTARGQAEETVRTIYSLDIEKSGD
LITIRIKGSGFLYNMVRIIAGTLMKVGMGVYPPSHVEEILDARDRKAAGPKAAAKGLTLV
SLDYETELKNQIHGENKDWSYTLNQEKILSEGNAWLTIHRCRAEDFDRLLVRVVHQAVQN
GARTVFARDEETVGRIILGKPYGYYVFQADFENKGWAVTQK
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgggttaagatgattgtggcctatgacggtaccaattactgcggctggcagatc
cagaacaacgggattaccattgaggaggtcctaaataaggaactgactagccttttaaaa
gagccaatcaccgtgatcggggccagcagaaccgattctggggttcactcagaaggaaat
gtggcggtctttgatacggagaaccggatgcctgccgataaaatatgttttgccttaaac
cagaggcttccggatgatatccggattctccagtcccaggaggttaggccggattatcat
ccgagaaagcaaaactgtgtcaagacttatgaatataaaattatgaaccggaaaattgaa
gtgccaaccctgagactttacagctatttttgttactttcccctggatgtggaacggatg
cgggaaggtggggcatacctggtgggagaacacgattttaaaagcttctgtacggccaga
gggcaggcggaagagacggtgcgtaccatttacagcctggacattgaaaagagcggggat
ctgattaccatacgaatcaagggaagcggcttcctgtataacatggtacggatcattgcc
ggaacactgatgaaggtgggcatgggagtgtatcccccttcccatgtggaagaaatcctt
gatgccagggacaggaaggcagccggaccaaaggcagcggcaaaagggcttactctggta
agccttgattatgaaacggaacttaagaatcagatccatggtgaaaataaggattggagc
tataccctgaatcaggaaaagatcctttcagagggaaatgcctggcttaccatccaccgg
tgcagggcggaagattttgacaggcttttggtccgggtggtacatcaggcagtacaaaat
ggtgccaggacggtttttgccagagatgaggaaaccgttggaaggattattttgggaaag
ccctatggatattatgtttttcaggctgattttgaaaacaagggctgggcagtgacgcaa
aaatag
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