Clostridium saccharolyticum WM1: Closa_3839
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Entry
Closa_3839 CDS
T01288
Name
(GenBank) transcriptional regulator, LacI family
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
csh
Clostridium saccharolyticum WM1
Brite
KEGG Orthology (KO) [BR:
csh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csh03000
]
Closa_3839
Transcription factors [BR:
csh03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Closa_3839
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_3
HTH_31
MarR
HTH_Tnp_ISL3
HTH_7
Trp_repressor
HTH_26
HTH_AraC
HTH_38
TetR_N
HTH_24
HTH_23
HTH_AsnC-type
TnsD
HTH_IclR
HTH_11
HTH_Crp_2
HTH_28
TrmB
HTH_DeoR
Motif
Other DBs
NCBI-ProteinID:
ADL06357
UniProt:
D9R0C4
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Position
4161752..4162759
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AA seq
335 aa
AA seq
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MKQEKITIEEIARQAGVSPATVSRVQNHRELVKADTVKRVESTMAALGYAFESTALPSIE
EQPLIVLNIPGIENVFYQEVIKGARVSAKAHGCHLLINESPLDRGSIRNFCNLLHRVNAA
GSILLNRASEEQLKQIRAITPLVQCCEYNEDASGFPYVSIDDFSAAEAATGYLCNCGCNK
IALINGPLSFKYAVKRQEGYLSALKKAEISVPQNWIIQLPEINYQMAYAAICRLLNSEPR
PNAFFVASDIFAAAVIRAAMRFKLNVPKDIMVVGFDNIEFSTMTCPSITTVNQPRLQLGY
TACEMLLEMMENPFSSPKSLILDAELVIRESTAKI
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaggaaaaaattacaatagaagaaattgccagacaggcaggggtttcgccggct
acggtctcccgtgtgcaaaaccacagggagctggtcaaggcagataccgtcaaacgggtg
gaaagcaccatggccgcccttggatatgctttcgaatccaccgccctgccatccattgaa
gaacagccgctgattgttttaaatattccggggattgagaatgtgttctatcaggaggtc
attaagggggccagagtttctgcaaaggctcacggctgccaccttctcatcaatgaatcc
cccttagaccgggggtctatccgaaacttctgcaacctgctccaccgggtcaatgccgcc
ggttccatcctgttaaaccgggcatcggaagaacagctaaagcagatacgggctattact
cctctggtgcaatgctgcgaatacaacgaggacgcctccggattcccttatgtcagcatt
gatgacttttccgcagcagaagctgcaaccggatacttatgcaactgcggctgcaataag
attgccctgatcaacggccctttaagctttaagtatgcggtaaagcgccaggagggatac
ttaagcgctctgaaaaaagcggaaatctccgtacctcaaaactggatcatacagcttccg
gagatcaactaccagatggcctacgctgccatctgccgtctgttaaacagcgagcccaga
cccaacgccttctttgttgcctctgatatttttgctgccgccgtcatccgggctgcaatg
cgctttaagcttaatgtgccaaaggatattatggtggtgggctttgataacattgaattt
tccacaatgacctgcccttccattacaacggtcaaccagccccggctgcagcttgggtat
accgcctgcgaaatgcttctggaaatgatggaaaaccccttcagctctccaaaatcactg
atcctggatgcagagctggtgatccgggaatccactgcaaagatctga
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