Clostridium saccharolyticum WM1: Closa_4120
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Entry
Closa_4120 CDS
T01288
Name
(GenBank) alpha amylase catalytic region
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
csh
Clostridium saccharolyticum WM1
Pathway
csh00500
Starch and sucrose metabolism
csh01100
Metabolic pathways
csh01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
csh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Closa_4120
Enzymes [BR:
csh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
Closa_4120
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
CBM_48
Alpha-amylase_C
Isoamylase_C
ISOA1-3_C
Motif
Other DBs
NCBI-ProteinID:
ADL06627
UniProt:
D9R2K3
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Position
complement(4463728..4465566)
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AA seq
612 aa
AA seq
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MEQYKIAKHEMVAYPMGLSKVSGGIRFCVAAKGENCKVHIFKAGAEEPDQTLSFPAEFRK
GDVWNMTVLGKNFEGLEYCFEIDGKLFSDPYGKCFTGRETWGDLEHASALLRTPVKGTDF
DWEGDRSPQIPYEDSIIYRLHNRGFTKHASSKVKNKGTFDAIEEKIPYLKELGVTAVELM
PVNEFSEVIMVEYVHGDPAGVDKPSGKLNYWGYTAGCYFAPKASYAAGNDPVLEFKSLVK
ALHKEGLEVIVELYFTGKEPPSFVLDAVRFWADEYHVDGIHLVGEIPLELLGRDPYLSRI
KLLAVSWEPVSEGTARHLGEYNDGFLIDMRRVLKGDEEQMKNLAFRTRRNPAGYGIINYM
ANTNGFPMMDMVSYDTRHNEGNGENNQDGNPYNYSWNCGVEGPTKRKKVMELRKKQLRNA
FLLLFLSQGTPLIMAGDEFGNSQSGNNNAYCQDNEVSWLNWNLVRTNQDILDFVKAVIAF
RKAHPVFHMPKEPRIMDYLACGFPDVSYHGVKAWCPEFDNFRRQLGIFYWGEYGKKPDGT
HDNNFFVAYNMHWEPHEFDLPNLPKKERWHVVFHTDKTVENGMYPEGKEPAAEGKRFLVP
SRSIVVFMGKNN
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggaacagtataagattgcaaagcatgaaatggtggcttatcctatggggctttctaag
gtatccggagggatccgcttttgtgtggctgcaaaaggggagaattgcaaggtccatatt
tttaaggctggggcagaagagccggaccagactctttcttttcctgcagagtttagaaag
ggcgacgtatggaacatgaccgttctgggaaagaattttgaagggctggagtactgcttt
gaaatcgatggaaagctgttttctgatccttatggcaaatgctttaccggacgggagaca
tggggggatcttgaacatgcttcggctcttttaaggactcccgtaaaggggacggatttt
gactgggaaggggacagatctcctcagattccatatgaggacagcatcatataccggctt
cataaccggggttttacaaagcatgcctcttccaaggtaaaaaataaaggcacctttgat
gccatagaggagaagatcccatacttaaaagaactaggcgttactgctgtggaactgatg
ccggtcaatgaattttccgaggtcatcatggtggaatatgtgcatggggaccctgccggt
gtggataagccttcggggaaattaaattactggggatacacagcaggctgttattttgct
cccaaggcctcctatgcagcagggaatgatcctgttctggagtttaaaagcctcgtgaag
gctcttcacaaggagggcctggaagtgatcgtggagctttactttaccggaaaagaacct
ccctcttttgttcttgatgcagtccgtttctgggcggatgaataccatgtggatggaatc
catctggtaggagagattcccttagagcttcttggcagagatccatatttaagccggatc
aagctgcttgctgtctcctgggaaccggtctcagaaggtacggccaggcacttgggggag
tataacgacggttttctcatagatatgcgccgggtattgaagggagatgaagagcagatg
aaaaatcttgccttccgtaccaggagaaatccggccggatacgggatcatcaactatatg
gccaataccaacggctttcctatgatggatatggtgtcctatgacaccaggcacaatgag
gggaacggagagaataaccaggatggcaatccctacaattattcctggaactgcggggtg
gaaggtcccaccaagcggaaaaaggtgatggagcttcggaagaagcagctgcgaaatgca
tttctccttttatttttaagccagggaactcccctgatcatggcaggagatgaattcggc
aattcccagtcagggaataataatgcctattgccaggacaatgaggtgtcgtggcttaat
tggaatcttgtcaggaccaatcaggatatcctggattttgtaaaggctgttatcgccttt
cgtaaggcacatcctgtatttcatatgcctaaggagcccaggatcatggattatctggcc
tgcggctttccggatgtttcttaccatggtgtaaaggcatggtgcccggaatttgataat
ttccggcgccagcttggaattttttattggggagaatatggaaagaagccggatggaacc
catgacaacaactttttcgtggcctataacatgcattgggagccccatgaatttgatctg
cccaatcttccgaagaaggagcggtggcatgtagtctttcatacggataaaacggttgaa
aacggcatgtatcccgaagggaaggagcctgcggcagaaggcaagaggtttctggttcct
tccaggtccattgtggtgtttatgggaaagaataattag
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